RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LRRC4CQ9HCJ2 640 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 MOCS1Q9NZB8 636 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 SLC2A6Q9UGQ3 507 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 HS3ST3A1Q9Y663 406 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 CFAP54Q96N23 3096 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 GLYATL1P3A0A0U1RQE8 302 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 A0A1W2PPC4 97 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 PRAMEF26H0Y7S4 382 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ABHD2P08910 425 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 HNRNPA2B1P22626 353 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 TRIM23P36406 574 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ARSDP51689 593 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 GPX6P59796 221 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ILF2Q12905 390 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 MTM1Q13496 603 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 PEX6Q13608 980 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ITGA9Q13797 1035 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 LRRC14Q15048 493 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 LONRF1Q17RB8 773 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 WSCD2Q2TBF2 565 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ADAMTSL4Q6UY14 1074 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 SNX20Q7Z614 316 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 GALNT7Q86SF2 657 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ANKMY2Q8IV38 441 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 CNTN4Q8IWV2 1026 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 PALM2Q8IXS6 379 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 FRMD1Q8N878 549 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 TMEM145Q8NBT3 493 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 HDAC10Q969S8 669 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ZNF669Q96BR6 464 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 BIRC7Q96CA5 298 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 AP2M1Q96CW1 435 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 TBATAQ96M53 351 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 ORAI3Q9BRQ5 295 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 CDC42EP4Q9H3Q1 356 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 NINJ2Q9NZG7 142 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 FKBPLQ9UIM3 349 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 COQ6Q9Y2Z9 468 aa11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 TP53BP1Q12888 1972 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-220ENST00000514830 CCDC162PA2VCL2 907 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 HRO43593 1189 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 BUD23O43709 281 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 ERLIN1O75477 346 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 SRP72O76094 671 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 PAK4O96013 591 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 SOD1P00441 154 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 C1QAP02745 245 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 BCKDHBP21953 392 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 CD27P26842 260 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 FOXN2P32314 431 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 STX2P32856 288 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 PMS2P54278 862 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 PRAMEP78395 509 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 RPL6Q02878 288 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 CACNG1Q06432 222 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 NFATC2Q13469 925 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 PTPRCAPQ14761 206 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 KYNUQ16719 465 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 PMS2CLQ68D20 193 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 PNCKQ6P2M8 343 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 ZC3H14Q6PJT7 736 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 CERS6Q6ZMG9 384 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 RFLNAQ6ZTI6 216 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 C3orf62Q6ZUJ4 267 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 LPCAT2Q7L5N7 544 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 GSPT2Q8IYD1 628 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 CNPY4Q8N129 248 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 OR4L1Q8NH43 312 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 C1orf216Q8TAB5 229 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 GABPB2Q8TAK5 448 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 CALML6Q8TD86 181 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 ULK4Q96C45 1275 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 CERS2Q96G23 380 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 C9orf72Q96LT7 481 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 TCF12Q99081 682 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 TRIM56Q9BRZ2 755 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 RIOK2Q9BVS4 552 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 BPIFA1Q9NP55 256 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 LRP4O75096 1905 aa11.91□□□□□ -0.5
PDLIM5-220ENST00000514830 PIKFYVEQ9Y2I7 2098 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 IGLV3-16A0A075B6K0 115 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 TCRBV9S1A1TA0A576 114 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 FAM47DPA6NHR8 397 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 MAP3K13O43283 966 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 RIPK2O43353 540 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 VAPBO95292 243 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 PRAMEF1O95521 474 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 GOT2P00505 430 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 SLC4A1P02730 911 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 ITGALP20701 1170 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 OGNP20774 298 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 SSTR1P30872 391 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 AKT2P31751 481 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 MC4RP32245 332 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 PHBP35232 272 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 HOXD12P35452 270 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 DPP6P42658 865 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 YPEL5P62699 121 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 MGAT5Q09328 741 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 OVGP1Q12889 678 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms