RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-222	ENST00000514654	FAM83D	Q9H4H8	585 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	MIOS	Q9NXC5	875 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	PRDM4	Q9UKN5	801 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	TLR6	Q9Y2C9	796 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	ZNF510	Q9Y2H8	683 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	GRIN2D	O15399	1336 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	NUP188	Q5SRE5	1749 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	CNTRL	Q7Z7A1	2325 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654		A0A0J9YYE9	177 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	KPNA5	O15131	536 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	FFAR2	O15552	330 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	EFCAB14	O75071	495 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	SLC22A3	O75751	556 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	RNASEH2A	O75792	299 aa	Known RBP	6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	TOP3B	O95985	862 aa	Known RBP	6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	CHRNG	P07510	517 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	SLC35G4	P0C7Q5	338 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	SPAM1	P38567	509 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	TRPC1	P48995	793 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	NAE1	Q13564	534 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	CBX2	Q14781	532 aa	Predicted RBP	6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	TXNDC11	Q6PKC3	985 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	SPESP1	Q6UW49	350 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	VN1R5	Q7Z5H4	357 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	GPR180	Q86V85	440 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	RALGPS2	Q86X27	583 aa	Predicted RBP	6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	TDRP	Q86YL5	185 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	ACTRT2	Q8TDY3	377 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	SH3RF2	Q8TEC5	729 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	PAWR	Q96IZ0	340 aa	Known RBP	6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	PANX1	Q96RD7	426 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	FERD3L	Q96RJ6	166 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	EBF4	Q9BQW3	602 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	HTATIP2	Q9BUP3	242 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	IPPK	Q9H8X2	491 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	ADPRHL2	Q9NX46	363 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	DUS2	Q9NX74	493 aa	Known RBP	6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	TBC1D14	Q9P2M4	693 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	KCTD3	Q9Y597	815 aa		6.15	□□□□□ -1.42
ATP2C1-222	ENST00000514654	IRS2	Q9Y4H2	1338 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	KAT6A	Q92794	2004 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	KNL1	Q8NG31	2342 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654		A0A1W2PQ67	120 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	FAM72C	H0Y354	149 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	TRIM38	O00635	465 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	EDIL3	O43854	480 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	NRP2	O60462	931 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	SHOX2	O60902	331 aa	Predicted RBP	6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	MT-ND1	P03886	318 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	ALPI	P09923	528 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	IMPDH2	P12268	514 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	PTPN2	P17706	415 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	HTRA3	P83110	453 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	SULT2A1	Q06520	285 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	FAM72A	Q5TYM5	149 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	FAM72D	Q6L9T8	149 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	ZCCHC8	Q6NZY4	707 aa	Known RBP	6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	RINL	Q6ZS11	566 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	FAM72B	Q86X60	149 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	IGDCC3	Q8IVU1	814 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	PNPT1	Q8TCS8	783 aa	Known RBP	6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	BRSK1	Q8TDC3	778 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	KCTD13	Q8WZ19	329 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	C19orf60	Q96EN9	201 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	NPY6R	Q99463	290 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	AARSD1	Q9BTE6	412 aa	Known RBP	6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	R3HDML	Q9H3Y0	253 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	DDX18	Q9NVP1	670 aa	Known RBP	6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	KLHL28	Q9NXS3	571 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	AK5	Q9Y6K8	562 aa		6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	ATXN2	Q99700	1313 aa	Known RBP	6.15	□□□□□ -1.43
ATP2C1-222	ENST00000514654	KIAA0100	Q14667	2235 aa	Known RBP	6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654		H3BM21	787 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	STK16	O75716	305 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	CAPN15	O75808	1086 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	COL6A2	P12110	1019 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	CCL5	P13501	91 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	AMD1	P17707	334 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	EFNA1	P20827	205 aa	Predicted RBP	6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	AQP1	P29972	269 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	HOXA11	P31270	313 aa	Predicted RBP	6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	GJA5	P36382	358 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	RANBP1	P43487	201 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	IDH2	P48735	452 aa	Known RBP	6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	CACNG1	Q06432	222 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	BNIP1	Q12981	228 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	PTPRCAP	Q14761	206 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	PHKG1	Q16816	387 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	LSM12	Q3MHD2	195 aa	Known RBP	6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	ALF	Q53S48	1182 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	ATAD3B	Q5T9A4	648 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	FAM46C	Q5VWP2	391 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	LYPLAL1	Q5VWZ2	237 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	ZYG11A	Q6WRX3	759 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	C14orf80	Q86SX3	495 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	SAPCD2	Q86UD0	394 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	REM2	Q8IYK8	340 aa	Predicted RBP	6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	STX19	Q8N4C7	294 aa		6.14	□□□□□ -1.43
ATP2C1-222	ENST00000514654	ZBTB2	Q8N680	514 aa		6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms