RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 NEMP1O14524 444 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 ADH1BP00325 375 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 ESR1P03372 595 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 CHRM1P11229 460 aaPredicted RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 CD9P21926 228 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 TIE1P35590 1138 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 KIR2DL1P43626 348 aaPredicted RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 WDR4P57081 412 aaKnown RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 TAS2R39P59534 338 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 LRRC14Q15048 493 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 DBN1Q16643 649 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 FAM83EQ2M2I3 478 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 HSF5Q4G112 596 aaPredicted RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 TMEM196Q5HYL7 178 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 PPM1JQ5JR12 505 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 AGAP9Q5VTM2 703 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 PTCRAQ6ISU1 281 aaPredicted RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 KLC3Q6P597 504 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 ERN2Q76MJ5 926 aaKnown RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 CPLX4Q7Z7G2 160 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 LDB1Q86U70 411 aaPredicted RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 TSPAN33Q86UF1 283 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 MMAAQ8IVH4 418 aaKnown RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 HEXDCQ8WVB3 486 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 ATXN2LQ8WWM7 1075 aaKnown RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 CHMP6Q96FZ7 201 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 FAM111AQ96PZ2 611 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 RSPH9Q9H1X1 276 aaPredicted RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 FAM96AQ9H5X1 160 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 TAS2R13Q9NYV9 303 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 FNDC3AQ9Y2H6 1198 aaKnown RBP15.93■□□□□ 0.14
NUP54-214ENST00000514307 ATG2AQ2TAZ0 1938 aa15.93■□□□□ 0.14
NUP54-214ENST00000514307 UBA6A0AVT1 1052 aaPredicted RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 PRAMEF1O95521 474 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 VIMP08670 466 aaKnown RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 PKMP14618 531 aaKnown RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 C5AR1P21730 350 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 FMO4P31512 558 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 PPARDQ03181 441 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 NFATC2Q13469 925 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 PON2Q15165 354 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 ZKSCAN8Q15776 578 aaPredicted RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 CHRNA6Q15825 494 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 TMEM52BQ4KMG9 183 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 SLC44A4Q53GD3 710 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 NAIF1Q69YI7 327 aaPredicted RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 FAM151BQ6UXP7 276 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 SERPINA9Q86WD7 417 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 RBFAQ8N0V3 343 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 CCDC63Q8NA47 563 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 GDAP1Q8TB36 358 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 LRRC8CQ8TDW0 803 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 ACOX2Q99424 681 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 AARSD1Q9BTE6 412 aaKnown RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 CLPBQ9H078 707 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 NSRP1Q9H0G5 558 aaKnown RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 CAB39LQ9H9S4 337 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 SLC2A4RGQ9NR83 387 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 CRLS1Q9UJA2 301 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 SARDHQ9UL12 918 aa15.92■□□□□ 0.14
NUP54-214ENST00000514307 PRRC2BQ5JSZ5 2229 aaKnown RBP15.92■□□□□ 0.14
NUP54-214ENST00000514307 PRMT5O14744 637 aaPredicted RBP15.91■□□□□ 0.14
NUP54-214ENST00000514307 WNT9AO14904 365 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 VPS26AO75436 327 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 RHOBTB1O94844 696 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 KLHL2O95198 593 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 ELFN1P0C7U0 828 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 DHRS4L1P0CG22 281 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 SRFP11831 508 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 ABCG1P45844 678 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 DCDC1P59894 354 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 SEMA3AQ14563 771 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 ITIH4Q14624 930 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 ACOX1Q15067 660 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 PDK4Q16654 411 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 ZNF284Q2VY69 593 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 ZNF789Q5FWF6 425 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 ATG16L1Q676U5 607 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 PARS2Q7L3T8 475 aaKnown RBP15.91■□□□□ 0.14
NUP54-214ENST00000514307 CMC1Q7Z7K0 106 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 NLRP8Q86W28 1048 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 NUDCD3Q8IVD9 361 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 SFTPA1Q8IWL2 248 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 PIANPQ8IYJ0 282 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 GPR26Q8NDV2 337 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 OR2T3Q8NH03 318 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 RDH11Q8TC12 318 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 LPGAT1Q92604 370 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 NMRAL1Q9HBL8 299 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 GPAMQ9HCL2 828 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 MLXIPLQ9NP71 852 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 HEBP1Q9NRV9 189 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 SLC17A7Q9P2U7 560 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 NFKBIL1Q9UBC1 381 aaPredicted RBP15.91■□□□□ 0.14
NUP54-214ENST00000514307 HCN2Q9UL51 889 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 SCML1Q9UN30 329 aa15.91■□□□□ 0.14
NUP54-214ENST00000514307 TRBV5-4A0A0C4DH59 114 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 AGAP14A8MT82 685 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 TSPAN6O43657 245 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms