RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 L1RE1Q9UN81 338 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PCDHGB5Q9Y5G0 923 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ILVBLA1L0T0 632 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 KLRG2A4D1S0 409 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 ENPP3O14638 875 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 AP5Z1O43299 807 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 OR6B1O95007 311 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ZNF30P17039 623 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 POLE2P56282 527 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TRAF2Q12933 501 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SGCBQ16585 318 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 PAPD7Q5XG87 772 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 MFSD5Q6N075 450 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 RTL4Q6ZR62 310 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 EIF3MQ7L2H7 374 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 GJD3Q8N144 294 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 UBR7Q8N806 425 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 GPR156Q8NFN8 814 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 MAPK15Q8TD08 544 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 Q96MT0 163 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 WDR24Q96S15 920 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SLC2A11Q9BYW1 496 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TNKS2Q9H2K2 1166 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 STMN3Q9NZ72 180 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 DMTF1Q9Y222 760 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ABCC6O95255 1503 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 IRGMA1A4Y4 181 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TAF4O00268 1085 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SLC28A2O43868 658 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 CYB5AP00167 134 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 COL6A2P12110 1019 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 CCZ1BP86790 482 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 CCZ1P86791 482 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 EPS8Q12929 822 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TRIM32Q13049 653 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TEAD2Q15562 447 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 LDLRAD1Q5T700 205 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 RFWD3Q6PCD5 774 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ABHD13Q7L211 337 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 OAFQ86UD1 273 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 LRRTM4Q86VH4 590 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 C12orf29Q8N999 325 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 KYQ8NBH2 561 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 OR6K2Q8NGY2 324 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 UTP15Q8TED0 518 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 DLG3Q92796 817 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 IGSF21Q96ID5 467 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 KLHL5Q96PQ7 755 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TTYH3Q9C0H2 523 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 PCDH12Q9NPG4 1184 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SEMA4BQ9NPR2 832 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 NUDT4Q9NZJ9 180 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 MAT2BQ9NZL9 334 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 RBM7Q9Y580 266 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 WASHC1A8K0Z3 465 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 WASH3PC4AMC7 463 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 BUD23O43709 281 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 USP12O75317 370 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 LDLRP01130 860 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 HSD17B3P37058 310 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 NSG1P42857 185 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ST13P50502 369 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 SELENOVP59797 346 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 DLG4P78352 724 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ST3GAL1Q11201 340 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SAMD4BQ5PRF9 694 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 TTC33Q6PID6 262 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 WASH2PQ6VEQ5 465 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SLC29A4Q7RTT9 530 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 FAM129CQ86XR2 697 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ZC3H7AQ8IWR0 971 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 ADHFE1Q8IWW8 467 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SIX5Q8N196 739 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 IL22RA1Q8N6P7 574 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SMYD1Q8NB12 490 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 KAT5Q92993 513 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ZDHHC12Q96GR4 267 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 MIPEPQ99797 713 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 AARSD1Q9BTE6 412 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 MTF2Q9Y483 593 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 SPIN1Q9Y657 262 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 SLIT2O94813 1529 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 XKRYO14609 159 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 KMOO15229 486 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 KCNE1P15382 129 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 PECAM1P16284 738 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 SUOXP51687 545 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 AQP5P55064 265 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 C1QTNF8P60827 252 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 MAPKAPK3Q16644 382 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 SMYD5Q6GMV2 418 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 CCDC81Q6ZN84 652 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TRPM8Q7Z2W7 1104 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 NUP54Q7Z3B4 507 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TMPRSS11BQ86T26 416 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 TAC4Q86UU9 113 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 C1orf127Q8N9H9 656 aa4.23□□□□□ -1.73
VCAN-209ENST00000513016 ZNF473Q8WTR7 871 aaKnown RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 JSRP1Q96MG2 331 aaPredicted RBP4.23□□□□□ -1.73
VCAN-209ENST00000513016 FNDC11Q9BVV2 318 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms