RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NUDT22Q9BRQ3 303 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 ABCG8Q9H221 673 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 TRIT1Q9H3H1 467 aaKnown RBP12.51□□□□□ -0.41
VEGFA-216ENST00000512683 KCNK4Q9NYG8 393 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 VPS18Q9P253 973 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 NENFQ9UMX5 172 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 TENM4Q6N022 2769 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 NPIPB15A6NHN6 443 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 ZNF891A8MT65 544 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 GOLGA6L19H0YKK7 550 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 CYP1A2P05177 515 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 FAM87AP0C7U9 286 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 RARAP10276 462 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 AK4P27144 223 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 UGT1A3P35503 534 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 PTSQ03393 145 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 TRAF2Q12933 501 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 SMTNL2Q2TAL5 461 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 ALG1LQ6GMV1 187 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 TIGD7Q6NT04 549 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 SFTPA2Q8IWL1 248 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 PGBD5Q8N414 524 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 IL22RA1Q8N6P7 574 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 FAM71BQ8TC56 605 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 AHCYL2Q96HN2 611 aaKnown RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 COX14Q96I36 57 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 TSGA13Q96PP4 275 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 LYSMD1Q96S90 227 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 SLC38A3Q99624 504 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 SPRY4Q9C004 299 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 POLR1EQ9GZS1 481 aaKnown RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 STN1Q9H668 368 aaKnown RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 SARS2Q9NP81 518 aaKnown RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 FBXO8Q9NRD0 319 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 ETNK2Q9NVF9 386 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 SLC39A1Q9NY26 324 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 IP6K2Q9UHH9 426 aa12.5□□□□□ -0.41
VEGFA-216ENST00000512683 LUC7L2Q9Y383 392 aaKnown RBP12.5□□□□□ -0.41
VEGFA-216ENST00000512683 A0A0J9YYE9 177 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 MATN3O15232 486 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 DUX1O43812 170 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 TRBC1P01850 177 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
VEGFA-216ENST00000512683 CASP14P31944 242 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 EPHB1P54762 984 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 EPHA4P54764 986 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 MC2RQ01718 297 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 MC1RQ01726 317 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 SLC25A11Q02978 314 aaKnown RBP12.49□□□□□ -0.41
VEGFA-216ENST00000512683 HADHQ16836 314 aaKnown RBP12.49□□□□□ -0.41
VEGFA-216ENST00000512683 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-216ENST00000512683 DENND2CQ68D51 928 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 ALKBH5Q6P6C2 394 aaKnown RBP12.49□□□□□ -0.41
VEGFA-216ENST00000512683 CEACAM20Q6UY09 585 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 ARHGAP22Q7Z5H3 698 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 VASH2Q86V25 355 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 GALNT13Q8IUC8 556 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 CACNA2D3Q8IZS8 1091 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 MAML1Q92585 1016 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 HSPH1Q92598 858 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 ART4Q93070 314 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 SLC45A3Q96JT2 553 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 HERPUD2Q9BSE4 406 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 XPO4Q9C0E2 1151 aaKnown RBP12.49□□□□□ -0.41
VEGFA-216ENST00000512683 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.49□□□□□ -0.41
VEGFA-216ENST00000512683 LCMT1Q9UIC8 334 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 ST14Q9Y5Y6 855 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 B3GALT1Q9Y5Z6 326 aa12.49□□□□□ -0.41
VEGFA-216ENST00000512683 KIR2DS5A0A0G2JLQ3 304 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 A0A0G2JNG1 304 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 GOLGA6CA6NDK9 693 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 GOLGA6BA6NDN3 693 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 KIR2DS3K7RE56 304 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 MYO1FO00160 1098 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 SOD1P00441 154 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 GOLGA6DP0CG33 693 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 WT1P19544 449 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-216ENST00000512683 IL4RP24394 825 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 CCNCP24863 283 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 CCR10P46092 362 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 POLD2P49005 469 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 ARSDP51689 593 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 CLCNKAP51800 687 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 STC1P52823 247 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 ABHD18Q0P651 414 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 SRSF6Q13247 344 aaKnown RBP12.48□□□□□ -0.41
VEGFA-216ENST00000512683 KIR2DS5Q14953 304 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 NFKBIBQ15653 356 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 LRRC66Q68CR7 880 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 IYDQ6PHW0 289 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 SLC9B2Q86UD5 537 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 TSPAN33Q86UF1 283 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 MAP7D3Q8IWC1 876 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms