RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 WASHC5Q12768 1159 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 ARHGEF7Q14155 803 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 HLTFQ14527 1009 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLDND1-224ENST00000511667 NR1D2Q14995 579 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 PPP2R5EQ16537 467 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 TEX44Q53QW1 395 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 CERCAMQ5T4B2 595 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 HENMT1Q5T8I9 393 aaKnown RBP13.42□□□□□ -0.26
CLDND1-224ENST00000511667 RAD9BQ6WBX8 426 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 SPOCD1Q6ZMY3 1216 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 ZNF438Q7Z4V0 828 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 TMTC1Q8IUR5 882 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 NDUFAF2Q8N183 169 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 CCNYQ8ND76 341 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 OR6C4Q8NGE1 309 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 EXD1Q8NHP7 514 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 CCL4L1Q8NHW4 92 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 MAPK15Q8TD08 544 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 SCG3Q8WXD2 468 aaKnown RBP13.42□□□□□ -0.26
CLDND1-224ENST00000511667 SCAMP4Q969E2 229 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 HIC2Q96JB3 615 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
CLDND1-224ENST00000511667 DEPDC7Q96QD5 511 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 AGAP2Q99490 1192 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 PHPT1Q9NRX4 125 aaPredicted RBP13.42□□□□□ -0.26
CLDND1-224ENST00000511667 EFR3BQ9Y2G0 817 aa13.42□□□□□ -0.26
CLDND1-224ENST00000511667 A0A1W2PQM1 296 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CPED1A4D0V7 1026 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 SOWAHDA6NJG2 315 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 PPP1R12AO14974 1030 aaPredicted RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 SPOPO43791 374 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CSO75390 466 aaKnown RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CLDN7O95471 211 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 PYGLP06737 847 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 KRT10P13645 584 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CTSEP14091 401 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CA4P22748 312 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 PTPN3P26045 913 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CTNNA1P35221 906 aaKnown RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 PTPN7P35236 360 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CYLC1P35663 651 aaPredicted RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 SPINT3P49223 89 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 ITKQ08881 620 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 TFDP2Q14188 446 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 TFDP3Q5H9I0 405 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 BBS12Q6ZW61 710 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 BZW1Q7L1Q6 419 aaKnown RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 SFTPA2Q8IWL1 248 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 RCOR2Q8IZ40 523 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 KRT35Q92764 455 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 AP2M1Q96CW1 435 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 CCDC3Q9BQI4 270 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 HERPUD2Q9BSE4 406 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 ASCL3Q9NQ33 180 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 SAE1Q9UBE0 346 aaPredicted RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 GPR34Q9UPC5 381 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 ENTPD2Q9Y5L3 495 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 ZFC3H1O60293 1989 aaKnown RBP13.41□□□□□ -0.26
CLDND1-224ENST00000511667 SCN8AQ9UQD0 1980 aa13.41□□□□□ -0.26
CLDND1-224ENST00000511667 LOC285095A0A1B0GVY8 99 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 TERTO14746 1132 aaKnown RBP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 NUDT21O43809 227 aaKnown RBP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 CST8O60676 142 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 FGF1P05230 155 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 GLB1P16278 677 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 VAC14Q08AM6 782 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 RD3Q7Z3Z2 195 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 NT5DC3Q86UY8 548 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 RFX6Q8HWS3 928 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 SNRNP27Q8WVK2 155 aaKnown RBP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 MLPHQ9BV36 600 aaPredicted RBP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 MAK16Q9BXY0 300 aaKnown RBP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 LACRTQ9GZZ8 138 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 POLR1BQ9H9Y6 1135 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 GLOD4Q9HC38 313 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 MAGEE1Q9HCI5 957 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 CYP4F12Q9HCS2 524 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 SPATS2LQ9NUQ6 558 aaKnown RBP13.4□□□□□ -0.26
CLDND1-224ENST00000511667 VPS18Q9P253 973 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 SUFUQ9UMX1 484 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 PCDHGA8Q9Y5G5 932 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 PCDHA3Q9Y5H8 950 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 DUSP10Q9Y6W6 482 aa13.4□□□□□ -0.26
CLDND1-224ENST00000511667 PRR19A6NJB7 356 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 DNAJC6O75061 913 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 EPOP01588 193 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 CTNNA2P26232 953 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 CDC25BP30305 580 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 ADCY8P40145 1251 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 POLD2P49005 469 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 DCDC1P59894 354 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 ERVPABLB-1P60509 514 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 COPS2P61201 443 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 B4GALNT1Q00973 533 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 AP1B1Q10567 949 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms