RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PTRHD1Q6GMV3 140 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FBXL22Q6P050 247 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 Q6ZNB5 142 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ACAD11Q709F0 780 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 LRRC6Q86X45 466 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MAML2Q8IZL2 1156 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SLC5A8Q8N695 610 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 C4orf32Q8N8J7 132 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CCDC89Q8N998 374 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 POGLUT1Q8NBL1 392 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SLC4A11Q8NBS3 891 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 C3orf20Q8ND61 904 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MDM1Q8TC05 714 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FAM172AQ8WUF8 416 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RXFP2Q8WXD0 754 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ART4Q93070 314 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 BBS4Q96RK4 519 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 IKZF4Q9H2S9 585 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 COPS7BQ9H9Q2 264 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 UCK1Q9HA47 277 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FBXO8Q9NRD0 319 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 GIMAP4Q9NUV9 329 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 C14orf105Q9NVL8 296 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 BFARQ9NZS9 450 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SIX4Q9UIU6 781 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SATB2Q9UPW6 733 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DRG1Q9Y295 367 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 JRKLQ9Y4A0 524 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FADS3Q9Y5Q0 445 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RPS6KL1Q9Y6S9 549 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ACACAQ13085 2346 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 IGLON5A6NGN9 336 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TMCO5BA8MYB1 307 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 E5RJQ4 531 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 NDUFS3O75489 264 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 KRT37O76014 449 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ENDOD1O94919 500 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 AP2A2O94973 939 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TJP3O95049 919 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CTDNEP1O95476 244 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CISD3P0C7P0 127 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CLCN1P35523 988 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MSH2P43246 934 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 AIMP2Q13155 320 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TSTA3Q13630 321 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SLC14A2Q15849 920 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 UGP2Q16851 508 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ATP13A5Q4VNC0 1218 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ARSHQ5FYA8 562 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CCDC183Q5T5S1 534 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 B3GNTL1Q67FW5 361 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MRNIPQ6NTE8 343 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DPPA4Q7L190 304 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TIPARPQ7Z3E1 657 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 NXPE1Q8N323 547 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TTC30BQ8N4P2 665 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CCDC185Q8N715 623 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DNAAF3Q8N9W5 541 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FEZF2Q8TBJ5 459 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 GRK7Q8WTQ7 553 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SNRNP27Q8WVK2 155 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 P3H4Q92791 437 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PTERQ96BW5 349 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PGAP3Q96FM1 320 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FAR2Q96K12 515 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ZNF354BQ96LW1 612 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SLC46A1Q96NT5 459 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PELOQ9BRX2 385 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RNF38Q9H0F5 515 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ACTR5Q9H9F9 607 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ZFYVE1Q9HBF4 777 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CASS4Q9NQ75 786 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RBM22Q9NW64 420 aaKnown RBP eCLIP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CACNG4Q9UBN1 327 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FAM153AQ9UHL3 310 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TLK1Q9UKI8 766 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 EIF3LQ9Y262 564 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MFHAS1Q9Y4C4 1052 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CCDC78A2IDD5 438 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 TLCD2A6NGC4 264 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 SIGLEC16A6NMB1 481 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 TTC34A8MYJ7 566 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 ISM1B1AKI9 464 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 TMEM150CB9EJG8 249 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 WASH3PC4AMC7 463 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 CDX4O14627 284 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-209ENST00000511124 SCAMP3O14828 347 aaKnown RBP2.82□□□□□ -1.96
CLOCK-209ENST00000511124 EFSO43281 561 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 LATO43561 262 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 MMP20O60882 483 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 CBFA2T3O75081 653 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 ENTPD5O75356 428 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 ZWINTO95229 277 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 VNN2O95498 520 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 EFEMP2O95967 443 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 ERCC1P07992 297 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-209ENST00000511124 SRCP12931 536 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 TDGF1P13385 188 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 BMP7P18075 431 aa2.82□□□□□ -1.96
CLOCK-209ENST00000511124 SPAM1P38567 509 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms