RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 A0A0A6YYH2 397 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 GSAPA4D1B5 854 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 A6NJ64 397 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 F5H0A9 414 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CUTAO60888 179 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SH3BGRLO75368 114 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 GJB1P08034 283 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 NFICP08651 508 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 G6PDP11413 515 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CD33P20138 364 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CALML3P27482 149 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 MAT2AP31153 395 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 HSD17B2P37059 387 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CD86P42081 329 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CEBPDP49716 269 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TMPRSS3P57727 454 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 UBE2KP61086 200 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 FAAP100Q0VG06 881 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ASPRV1Q53RT3 343 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TMTC4Q5T4D3 741 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CARD17Q5XLA6 110 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CAMKMTQ7Z624 323 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 COMMD1Q8N668 190 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 OR5T3Q8NGG3 340 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.92□□□□□ -1.789e-9■■■■■ 41.5
NEDD4-209ENST00000508871 FEZF2Q8TBJ5 459 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 C7orf43Q8WVR3 580 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 BRI3BPQ8WY22 251 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 AKAP1Q92667 903 aaKnown RBP eCLIP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF764Q96H86 408 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC17Q96LX7 622 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CDRT15Q96T59 188 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 WRAP53Q9BUR4 548 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 KCNH6Q9H252 994 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ACTR8Q9H981 624 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RAD54BQ9Y620 910 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TAF6LQ9Y6J9 622 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 MYH7BA7E2Y1 1941 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 E9PI62 339 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 EEF2KO00418 725 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PER2O15055 1255 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 NPC1O15118 1278 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZW10O43264 779 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TSPAN1O60635 241 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TACC1O75410 805 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RECQL5O94762 991 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 HLA-DOAP06340 250 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 AOAHP28039 575 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 NUDT6P53370 316 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 UCP3P55916 312 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DSC2Q02487 901 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ID3Q02535 119 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PKP1Q13835 747 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 COLEC12Q5KU26 742 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ERMARDQ5T6L9 678 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SLC2A7Q6PXP3 512 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ERN2Q76MJ5 926 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SPATA19Q7Z5L4 167 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SPATA24Q86W54 205 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RASGEF1CQ8N431 466 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 UBL4BQ8N7F7 174 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SH3RF3Q8TEJ3 882 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 INTS14Q96SY0 518 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZFYVE21Q9BQ24 234 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 MTG1Q9BT17 334 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DCLK3Q9C098 648 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DNAJB12Q9NXW2 375 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ANAPC2Q9UJX6 822 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF148Q9UQR1 794 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RUVBL2Q9Y230 463 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SBF1O95248 1867 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 VPS37CA5D8V6 355 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FAM205CA6NFA0 338 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 A6NNZ2 444 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ISM1B1AKI9 464 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 B9A039 149 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PSMD11O00231 422 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ARHGAP33O14559 1287 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FARP2O94887 1054 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF202O95125 648 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MFN2O95140 757 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 LRATO95237 230 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CER1O95813 267 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SRPRAP08240 638 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PCNAP12004 261 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 IL10P22301 178 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 RPS12P25398 132 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 AVPR2P30518 371 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NTSR1P30989 418 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ARHGAP25P42331 645 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 RANBP1P43487 201 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CCT3P49368 545 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 IST1P53990 364 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NLRP11P59045 1033 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PON2Q15165 354 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MAPK6Q16659 721 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 VARS2Q5ST30 1063 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 DCST1Q5T197 706 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PRAMEF5Q5TYX0 476 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms