RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GPR89BP0CG08 455 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 GEMP55040 296 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 DARS2Q6PI48 645 aaKnown RBP19.77■□□□□ 0.76
SFXN1-209ENST00000508290 OGFOD3Q6PK18 319 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 B4GALNT4Q76KP1 1039 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 LRRC8AQ8IWT6 810 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 DTX3LQ8TDB6 740 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 PLEKHG4BQ96PX9 1271 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 ALS2CR12Q96Q35 445 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 SMIM14Q96QK8 99 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 FRMD8P1Q9BZ68 369 aaPredicted RBP19.77■□□□□ 0.76
SFXN1-209ENST00000508290 TMEM168Q9H0V1 697 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 MRPL40Q9NQ50 206 aaKnown RBP19.77■□□□□ 0.76
SFXN1-209ENST00000508290 DDX3YO15523 660 aaKnown RBP19.76■□□□□ 0.75
SFXN1-209ENST00000508290 ZW10O43264 779 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 MT-CO3P00414 261 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 PNLIPP16233 465 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 HMGCLP35914 325 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 TARDBPQ13148 414 aaKnown RBP eCLIP19.76■□□□□ 0.75
SFXN1-209ENST00000508290 CDCP2Q5VXM1 449 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 GUSBP11Q6P575 273 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 KDELC2Q7Z4H8 507 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 TRAM1L1Q8N609 369 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 FAM46DQ8NEK8 389 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 GPR156Q8NFN8 814 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 SPATA13Q96N96 652 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 OR2M4Q96R27 311 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 SUFUQ9UMX1 484 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 GUCA1BQ9UMX6 200 aa19.76■□□□□ 0.75
SFXN1-209ENST00000508290 TRABD2BA6NFA1 517 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 KCNN4O15554 427 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 CELA2BP08218 269 aaPredicted RBP19.75■□□□□ 0.75
SFXN1-209ENST00000508290 GLB1P16278 677 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 GNPDA1P46926 289 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 KLF1Q13351 362 aaPredicted RBP19.75■□□□□ 0.75
SFXN1-209ENST00000508290 SLC1A5Q15758 541 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 ZNF569Q5MCW4 686 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 SEL1L2Q5TEA6 688 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 RFLNAQ6ZTI6 216 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 GALNT13Q8IUC8 556 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 KYQ8NBH2 561 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 OXNAD1Q96HP4 312 aaPredicted RBP19.75■□□□□ 0.75
SFXN1-209ENST00000508290 MRGPRX2Q96LB1 330 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 HERPUD2Q9BSE4 406 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 DPEP2Q9H4A9 486 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 CAAP1Q9H8G2 361 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 UBP1Q9NZI7 540 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 GULP1Q9UBP9 304 aa19.75■□□□□ 0.75
SFXN1-209ENST00000508290 LRP4O75096 1905 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 A0A0U1RQS6 177 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 FAM149AA5PLN7 773 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 NUDT21O43809 227 aaKnown RBP19.74■□□□□ 0.75
SFXN1-209ENST00000508290 RTP5Q14D33 572 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 C14orf28Q4W4Y0 310 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 SIRPB2Q5JXA9 342 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 ANKRD20A2Q5SQ80 823 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 ANKRD20A1Q5TYW2 823 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 ANKRD20A3Q5VUR7 823 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 KCTD16Q68DU8 428 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 PHYKPLQ8IUZ5 450 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 IPMKQ8NFU5 416 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 WDR24Q96S15 920 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 C19orf43Q9BQ61 176 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 SPATA16Q9BXB7 569 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 FEZ2Q9UHY8 353 aaPredicted RBP19.74■□□□□ 0.75
SFXN1-209ENST00000508290 APPL1Q9UKG1 709 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 PACSIN2Q9UNF0 486 aaPredicted RBP19.74■□□□□ 0.75
SFXN1-209ENST00000508290 SHOC2Q9UQ13 582 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 PTPRBP23467 1997 aa19.74■□□□□ 0.75
SFXN1-209ENST00000508290 C5orf60A6NFR6 353 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 ASMTLO95671 621 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 CAPNS1P04632 268 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 ADCY8P40145 1251 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 PDE1BQ01064 536 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 P3H1Q32P28 736 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 PYCR3Q53H96 274 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 CERCAMQ5T4B2 595 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 DOK6Q6PKX4 331 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 RBM44Q6ZP01 1051 aaKnown RBP19.73■□□□□ 0.75
SFXN1-209ENST00000508290 PROSER1Q86XN7 944 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 TRIM58Q8NG06 486 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 EID2BQ96D98 161 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 AGAP2Q99490 1192 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 CCDC3Q9BQI4 270 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 CARD9Q9H257 536 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 SIRPGQ9P1W8 387 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 ZMIZ1Q9ULJ6 1067 aa19.73■□□□□ 0.75
SFXN1-209ENST00000508290 A0A0U1RQJ8 604 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 TMX2-CTNND1H3BSU7 103 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 INPP4BO15327 924 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 PIRTP0C851 137 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 MYF5P13349 255 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 CTBSQ01459 385 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 HLTFQ14527 1009 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■■■□ 23.7
SFXN1-209ENST00000508290 CLPPQ16740 277 aaPredicted RBP19.72■□□□□ 0.75
SFXN1-209ENST00000508290 AADACL2Q6P093 401 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 C17orf82Q86X59 251 aaPredicted RBP19.72■□□□□ 0.75
SFXN1-209ENST00000508290 LSMEM2Q8N112 164 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 GPR26Q8NDV2 337 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 SLC35B2Q8TB61 432 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms