RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CCDC81Q6ZN84 652 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 B3GNT8Q7Z7M8 397 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 NRROSQ86YC3 692 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 VSTM4Q8IW00 320 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 PELI3Q8N2H9 469 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 LPCAT1Q8NF37 534 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 CCL4L1Q8NHW4 92 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC35G2Q8TBE7 412 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 SH3KBP1Q96B97 665 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 COX14Q96I36 57 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 CCNL2Q96S94 520 aaPredicted RBP14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 FAM83DQ9H4H8 585 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 SPATS2LQ9NUQ6 558 aaKnown RBP14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 PCDHB11Q9Y5F2 797 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 LAMA5O15230 3695 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 C1orf232A0A0U1RR37 186 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 MTSS1O43312 755 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 ECEL1O95672 775 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 SOD1P00441 154 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 JCHAINP01591 159 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC5A2P31639 672 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 FASLGP48023 281 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 NR2C2P49116 596 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 SPINT3P49223 89 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 PYCR3Q53H96 274 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 ARHGAP40Q5TG30 622 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 PDPK2PQ6A1A2 396 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 CCDC70Q6NSX1 233 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC30A9Q6PML9 568 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 JAMLQ86YT9 394 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 SLITRK4Q8IW52 837 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 RHOT1Q8IXI2 618 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 RAPGEF5Q92565 580 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 PACSIN1Q9BY11 444 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 FOXP3Q9BZS1 431 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 TSPY26PQ9H489 355 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 LUC7LQ9NQ29 371 aaKnown RBP14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 PISDQ9UG56 409 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 AHCTF1Q8WYP5 2266 aa14.34□□□□□ -0.11
HMGCS1-203ENST00000507004 KIF26BQ2KJY2 2108 aa14.33□□□□□ -0.11
HMGCS1-203ENST00000507004 CELSR3Q9NYQ7 3312 aa14.33□□□□□ -0.11
HMGCS1-203ENST00000507004 OR5K4A6NMS3 321 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 MFAP3LO75121 409 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 ASMTLO95671 621 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 PRLP01236 227 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 ALDH4A1P30038 563 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 MAZP56270 477 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 CLN3Q13286 438 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 TFDP2Q14188 446 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 PHF19Q5T6S3 580 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 DOK6Q6PKX4 331 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 NYAP1Q6ZVC0 841 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 NT5DC3Q86UY8 548 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 NAGSQ8N159 534 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 PLD5Q8N7P1 536 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 OR4D9Q8NGE8 314 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 SCAMP4Q969E2 229 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 HERPUD2Q9BSE4 406 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 RIOK2Q9BVS4 552 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 EPB41L1Q9H4G0 881 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 NHEJ1Q9H9Q4 299 aaPredicted RBP14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 NFKBIL1Q9UBC1 381 aaPredicted RBP14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 CD84Q9UIB8 345 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 HEY1Q9Y5J3 304 aa14.33□□□□□ -0.12
HMGCS1-203ENST00000507004 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 B4GAT1O43505 415 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 MAP3K6O95382 1288 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 CLDN7O95471 211 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 FUCA1P04066 466 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 AK4P27144 223 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 CD86P42081 329 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 TNNT3P45378 269 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 DCDC1P59894 354 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 CFHR1Q03591 330 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 AP1B1Q10567 949 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 SLC10A2Q12908 348 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 QPCTQ16769 361 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 HENMT1Q5T8I9 393 aaKnown RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 AGBL5Q8NDL9 886 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 OR10G6Q8NH81 332 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 CALR3Q96L12 384 aaKnown RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 SLC38A3Q99624 504 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 ZSCAN5AQ9BUG6 496 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 SLC25A51Q9H1U9 297 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 CARD9Q9H257 536 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 ZFYVE1Q9HBF4 777 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 CPNE5Q9HCH3 593 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 MAGEE1Q9HCI5 957 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 PCDHGA3Q9Y5H0 932 aa14.32□□□□□ -0.12
HMGCS1-203ENST00000507004 IGSF10Q6WRI0 2623 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 KIR2DS5A0A0G2JLQ3 304 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 A0A0G2JNG1 304 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 AKR1B15C9JRZ8 316 aaPredicted RBP14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 KIR2DS3K7RE56 304 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 KCNK1O00180 336 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 PSTPIP1O43586 416 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 SPOPO43791 374 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms