RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CRYBG2Q8N1P7 616 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 SCML4Q8N228 414 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 WNT8BQ93098 351 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 PCDHGA8Q9Y5G5 932 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 SBF1O95248 1867 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 TOR1BO14657 336 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 HRH2P25021 359 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 HMGCS2P54868 508 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 GP2P55259 537 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 ADIGQ0VDE8 80 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 SLC14A2Q15849 920 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 UNC50Q53HI1 259 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 C6orf141Q5SZD1 244 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 DENND5AQ6IQ26 1287 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 CHDHQ8NE62 594 aaPredicted RBP17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 PPHLN1Q8NEY8 458 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 SLC9A7Q96T83 725 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 TBL1YQ9BQ87 522 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 TREX1Q9NSU2 369 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 KLQ9UEF7 1012 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 STAP1Q9ULZ2 295 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 PDE10AQ9Y233 779 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 PTGDR2Q9Y5Y4 395 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 ZSWIM8A7E2V4 1837 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 A0A1W2PP18 115 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 AXIN1O15169 862 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 HUS1O60921 280 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 GMNNO75496 209 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 FGF4P08620 206 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 BMP4P12644 408 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 PCMT1P22061 227 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 RPS12P25398 132 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 EEFSECP57772 596 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 SH3BP2P78314 561 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 ARL13BQ3SXY8 428 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 CATSPER4Q7RTX7 472 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 CCDC117Q8IWD4 279 aaPredicted RBP17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 ATP6V0D2Q8N8Y2 350 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 SPATA22Q8NHS9 363 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 SLC2A14Q8TDB8 520 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 TSPEARQ8WU66 669 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 NTAN1Q96AB6 310 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 AURKBQ96GD4 344 aaPredicted RBP17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 RNF145Q96MT1 663 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 BCL7BQ9BQE9 202 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 CXCL16Q9H2A7 254 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 NAALAD2Q9Y3Q0 740 aa17.05■□□□□ 0.32
SQSTM1-211ENST00000506690 DOCK1Q14185 1865 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 A0A087WZ62 844 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 GABARAPO95166 117 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 TCEA1P23193 301 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 KCNC1P48547 511 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 AIF1P55008 147 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 SCAPQ12770 1279 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 NFYCQ13952 458 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 TIGD2Q4W5G0 525 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 CATSPERGQ6ZRH7 1159 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 ANKRD49Q8WVL7 239 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 FDXACB1Q9BRP7 624 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 AAR2Q9Y312 384 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 ASPDHA6ND91 283 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 PIP5K1BO14986 540 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 INMTO95050 263 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 HPRP00739 348 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 LMO2P25791 158 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 HTR1EP28566 365 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 PIGFQ07326 219 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 IMPG1Q17R60 797 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 ZNF789Q5FWF6 425 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 TTC23Q5W5X9 447 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 KIAA0930Q6ICG6 404 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 NEK10Q6ZWH5 1172 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 ZCCHC7Q8N3Z6 543 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 TWIST2Q8WVJ9 160 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 TMBIM1Q969X1 311 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 RDH12Q96NR8 316 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 SLC2A13Q96QE2 648 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 TOR3AQ9H497 397 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 HACL1Q9UJ83 578 aa17.04■□□□□ 0.32
SQSTM1-211ENST00000506690 UTRNP46939 3433 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 MGEA5O60502 916 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 ARIH2O95376 493 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 TKTP29401 623 aaKnown RBP17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 HERVK_113P63132 956 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 NFKB2Q00653 900 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 ECT2LQ008S8 904 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 CDC20Q12834 499 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 GEN1Q17RS7 908 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 SLC22A16Q86VW1 577 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 PROSER1Q86XN7 944 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 KIAA2013Q8IYS2 634 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 ARL10Q8N8L6 244 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 OR6Q1Q8NGQ2 317 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 ERVK-6Q9BXR3 956 aa17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 WDR6Q9NNW5 1121 aaKnown RBP17.03■□□□□ 0.32
SQSTM1-211ENST00000506690 FAM118AQ9NWS6 357 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms