RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 TSPAN5P62079 268 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 SEMA3BQ13214 749 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 CUL1Q13616 776 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF273Q14593 569 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 INAVAQ3KP66 663 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM31Q5JXX7 168 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 KYAT3Q6YP21 454 aaKnown RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 SV2AQ7L0J3 742 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 PPP1R3BQ86XI6 285 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 SRRM1Q8IYB3 904 aaKnown RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 LRRC34Q8IZ02 419 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 SLC35F6Q8N357 371 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF420Q8TAQ5 688 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 FBXO30Q8TB52 745 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 COA7Q96BR5 231 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 LIN37Q96GY3 246 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 MYO19Q96H55 970 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 SIGLEC10Q96LC7 697 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 PKP4Q99569 1192 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 NAPGQ99747 312 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 POLR1EQ9GZS1 481 aaKnown RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ZMYND12Q9H0C1 365 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 RNF38Q9H0F5 515 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM168Q9H0V1 697 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 CENPHQ9H3R5 247 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ESRP2Q9H6T0 727 aaKnown RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 C10orf88Q9H8K7 445 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 NMRK2Q9NPI5 230 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 SEPT11Q9NVA2 429 aaKnown RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 DBR1Q9UK59 544 aaKnown RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 VAV3Q9UKW4 847 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 MSRB2Q9Y3D2 182 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 MTF2Q9Y483 593 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ATP6V1DQ9Y5K8 247 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 A0A0G2JLL6 359 aaPredicted RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 FAM170AA1A519 330 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 TCP10L2B9ZVM9 353 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 PROB1E7EW31 1015 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 QSOX1O00391 747 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CRYABP02511 175 aaKnown RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 SRGAP2BP0DMP2 458 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CYP2C8P10632 490 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 MUC1P15941 1255 aaPredicted RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 ETV4P43268 484 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 GNPDA1P46926 289 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 KCNC1P48547 511 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 GNG11P61952 73 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 OLR1P78380 273 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 STX3Q13277 289 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM63BQ5T3F8 832 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 AAGABQ6PD74 315 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 PRRT2Q7Z6L0 340 aaPredicted RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 DDX53Q86TM3 631 aaKnown RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 ABI1Q8IZP0 508 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 PCDH20Q8N6Y1 951 aaKnown RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CCDC197Q8NCU1 140 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 OR6P1Q8NGX9 317 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CALML6Q8TD86 181 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 SEPT8Q92599 483 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 HAUS1Q96CS2 278 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 PIWIL1Q96J94 861 aaKnown RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 ABHD1Q96SE0 405 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 AP5M1Q9H0R1 490 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 SEMA6BQ9H3T3 888 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 R3HDMLQ9H3Y0 253 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 DIABLOQ9NR28 239 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 GIMAP2Q9UG22 337 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CHKBQ9Y259 395 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 ANKRD6Q9Y2G4 727 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 PLLPQ9Y342 182 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 A0A087WV62 115 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 MAGEB16A2A368 324 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 ARGFXA6NJG6 315 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 BECN2A8MW95 431 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 J3KRW8 73 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 FSCN2O14926 492 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 VEGFDO43915 354 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CTAG2O75638 210 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 HSPA4LO95757 839 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 UQCRBP14927 111 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 ITGAXP20702 1163 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 GALNSP34059 522 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 ATP5C1P36542 298 aaKnown RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 VBP1P61758 197 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 TRIM25Q14258 630 aaKnown RBP2.27□□□□□ -2.05
NEDD4-205ENST00000506154 PSMD6Q15008 389 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CCNG2Q16589 344 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CYP2A13Q16696 494 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 BMT2Q1RMZ1 405 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 SKIDA1Q1XH10 827 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 CST9Q5W186 159 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 HIST2H2BCQ6DN03 193 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 HIST2H2BDQ6DRA6 164 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 MTFR2Q6P444 385 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 MAEAQ7L5Y9 396 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 TDRPQ86YL5 185 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 HIPK1Q86Z02 1210 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 MAP7D3Q8IWC1 876 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 KLHL36Q8N4N3 616 aa2.27□□□□□ -2.05
NEDD4-205ENST00000506154 MCUQ8NE86 351 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms