RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 KEAP1Q14145 624 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 SLC39A14Q15043 492 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 WDR78Q5VTH9 848 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 NADSYN1Q6IA69 706 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 KIAA0930Q6ICG6 404 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 JADE1Q6IE81 842 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF280DQ6N043 979 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 TMEM154Q6P9G4 183 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 PRSS57Q6UWY2 283 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 RBM23Q86U06 439 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 SRBD1Q8N5C6 995 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 PCDH20Q8N6Y1 951 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 HJURPQ8NCD3 748 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 LILRB1Q8NHL6 650 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 LMO3Q8TAP4 145 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 ELMOD3Q96FG2 381 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 PCYT2Q99447 389 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 SMARCAD1Q9H4L7 1026 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 GAREM1Q9H706 876 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 MTMR10Q9NXD2 777 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 SMARCAL1Q9NZC9 954 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 COPG2Q9UBF2 871 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 OR14J1Q9UGF5 321 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF215Q9UL58 517 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 ACSL5Q9ULC5 683 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 KCNS2Q9ULS6 477 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 LOXL2Q9Y4K0 774 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 CLIC4Q9Y696 253 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 SESN1Q9Y6P5 492 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 PDS5AQ29RF7 1337 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 PRSS47A8MTI9 375 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 A8MZ25 164 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 SPINT2O43291 252 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 RFPL2O75678 378 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 GFPT2O94808 682 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 DDNO94850 711 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 KCNK5O95279 499 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 PMS2P2O95744 297 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 TMEM11P17152 192 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 HOXD13P35453 343 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 CLCNKAP51800 687 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 TAS2R40P59535 323 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 ZBED6P86452 979 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 ECT2LQ008S8 904 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 IKQ13123 557 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 MEA1Q16626 185 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 PNLIPRP3Q17RR3 467 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 KIF19Q2TAC6 998 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 SOWAHCQ53LP3 525 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 KCNT1Q5JUK3 1230 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 PMS2CLQ68D20 193 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF324BQ6AW86 544 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 C16orf82Q7Z2V1 217 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 TICAM1Q8IUC6 712 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 TEX11Q8IYF3 940 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 RNF168Q8IYW5 571 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 SPATA22Q8NHS9 363 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 DUSP19Q8WTR2 217 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 ADGRG7Q96K78 797 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 EGLN2Q96KS0 407 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 OR2A14Q96R47 310 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 MTERF1Q99551 399 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 MEIS3Q99687 375 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 SRSF8Q9BRL6 282 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 PIGMQ9H3S5 423 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 PLK3Q9H4B4 646 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 SYNCQ9H7C4 482 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 PCDH9Q9HC56 1237 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 CD93Q9NPY3 652 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 CWC15Q9P013 229 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 FBXL17Q9UF56 701 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 NENFQ9UMX5 172 aa4.01□□□□□ -1.77
TOPBP1-204ENST00000505804 C4orf47A7E2U8 309 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 HS6ST1O60243 411 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 ICAM1P05362 532 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 LINC00271P0C7V0 271 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 DAOP14920 347 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 GABRB1P18505 474 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 ANXA7P20073 488 aaKnown RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 UBA1P22314 1058 aaKnown RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 ART1P52961 327 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 CLNS1AP54105 237 aaKnown RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 PDE1BQ01064 536 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 TFAP4Q01664 338 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 MC1RQ01726 317 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 CREB5Q02930 508 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 SLC20A2Q08357 652 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 IRF3Q14653 427 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 ASTE1Q2TB18 679 aaPredicted RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF805Q5CZA5 627 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 DCST1Q5T197 706 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 FRG2Q64ET8 278 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 TMEM198Q66K66 360 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 CCNI2Q6ZMN8 369 aaPredicted RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 FASTKD5Q7L8L6 764 aaKnown RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 SDCCAG8Q86SQ7 713 aaPredicted RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 SATL1Q86VE3 508 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 ADGRF2Q8IZF7 708 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 HM13Q8TCT9 377 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms