RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SIGIRRQ6IA17 410 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 NCEH1Q6PIU2 408 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 GSTA5Q7RTV2 222 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 NR2C2APQ86WQ0 139 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 ARHGAP12Q8IWW6 846 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 C1orf87Q8N0U7 546 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 ADSSL1Q8N142 457 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 KBTBD3Q8NAB2 608 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 CSNK2A3Q8NEV1 391 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 BBS10Q8TAM1 723 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 SECTM1Q8WVN6 248 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 HDAC2Q92769 488 aaKnown RBP3.83□□□□□ -1.8
CHD1-203ENST00000505657 APBB2Q92870 758 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 ABTB1Q969K4 478 aaPredicted RBP3.83□□□□□ -1.8
CHD1-203ENST00000505657 C1orf74Q96LT6 269 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 TMEM68Q96MH6 324 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 DUX5Q96PT3 197 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 MTERF1Q99551 399 aaKnown RBP3.83□□□□□ -1.8
CHD1-203ENST00000505657 MUC13Q9H3R2 512 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 PIGMQ9H3S5 423 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 PCDH9Q9HC56 1237 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 CORO1CQ9ULV4 474 aaPredicted RBP3.83□□□□□ -1.8
CHD1-203ENST00000505657 MAU2Q9Y6X3 613 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 TDRD9Q8NDG6 1382 aaKnown RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 CGNL1Q0VF96 1302 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 CYSRT1A8MQ03 144 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 RNASEH2AO75792 299 aaKnown RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 CCNDBP1O95273 360 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 IPO7O95373 1038 aaKnown RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 LAMP2P13473 410 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 RARGP13631 454 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 CAPN3P20807 821 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 CHMP24386 653 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 PSMA4P25789 261 aaKnown RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 APOBEC1P41238 236 aaKnown RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 TMPOP42166 694 aaKnown RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 FUT6P51993 359 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 ISL1P61371 349 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 SETQ01105 290 aaPredicted RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 NIPAL4Q0D2K0 466 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 FRG2Q64ET8 278 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 RAD9BQ6WBX8 426 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 KRBA2Q6ZNG9 492 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 TUBA1AQ71U36 451 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 ATG9AQ7Z3C6 839 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 OR5R1Q8NH85 324 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 LNX1Q8TBB1 728 aaPredicted RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 ARHGEF2Q92974 986 aaKnown RBP3.82□□□□□ -1.8
CHD1-203ENST00000505657 TTC14Q96N46 770 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 TUBA1CQ9BQE3 449 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 UBTD1Q9HAC8 227 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 KRT84Q9NSB2 600 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 TMEM30AQ9NV96 361 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 DONSONQ9NYP3 566 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 COPG2Q9UBF2 871 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 KCNG2Q9UJ96 466 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 PADI1Q9ULC6 663 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 VDAC3Q9Y277 283 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 OR2W1Q9Y3N9 320 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 LOXL2Q9Y4K0 774 aa3.82□□□□□ -1.8
CHD1-203ENST00000505657 DENND3A2RUS2 1198 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 PI4KAP2A4QPH2 592 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 GOLGA6L9A6NEM1 432 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 PRR23D1E9PI22 279 aaPredicted RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 H3BQ06 376 aaPredicted RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 M0QZ24 198 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 SPINT2O43291 252 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 BUB3O43684 328 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 TIPRLO75663 272 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 SLC25A12O75746 678 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 PRR23D2P0DMB1 279 aaPredicted RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 CDH1P12830 882 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 RRM1P23921 792 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 HOXC9P31274 260 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 ZNF132P52740 706 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 DLX5P56178 289 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 CLDN20P56880 219 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 FOXM1Q08050 763 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 GOLGA8DPQ0D2H9 430 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 SIM2Q14190 667 aaPredicted RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 CCDC96Q2M329 555 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 ZNF672Q499Z4 452 aaPredicted RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 STXBP5Q5T5C0 1151 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 GKAP1Q5VSY0 366 aaPredicted RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 BRAT1Q6PJG6 821 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 UNQ6126/PRO20091Q6UXV3 157 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 CACNA2D4Q7Z3S7 1137 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 SFR1Q86XK3 245 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 NAGSQ8N159 534 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 WDTC1Q8N5D0 677 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 NGEFQ8N5V2 710 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 PDILTQ8N807 584 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 HJURPQ8NCD3 748 aaPredicted RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 PPHLN1Q8NEY8 458 aaKnown RBP3.81□□□□□ -1.8
CHD1-203ENST00000505657 SLC44A1Q8WWI5 657 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 EGLN2Q96KS0 407 aa3.81□□□□□ -1.8
CHD1-203ENST00000505657 RRP7BPQ9NSQ0 103 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms