RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ARL5AQ9Y689 179 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 BPTFQ12830 3046 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 ESPNB1AK53 854 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 K7ESM1 405 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 DNALI1O14645 258 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 STX7O15400 261 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 DFNA5O60443 496 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 SLC4A1P02730 911 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 MLNP12872 115 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ENGP17813 658 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ADRA1DP25100 572 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 PSMA3P25788 255 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 DEKP35659 375 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 GPR1P46091 355 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 PTK2BQ14289 1009 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 POU6F1Q14863 301 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ZNF423Q2M1K9 1284 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 CERCAMQ5T4B2 595 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 RNASEH2BQ5TBB1 312 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ANKRD22Q5VYY1 191 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ARMC3Q5W041 872 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 PDPK2PQ6A1A2 396 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 LRRC8BQ6P9F7 803 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ADAMTSL4Q6UY14 1074 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ZNF534Q76KX8 674 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 SPATS2Q86XZ4 545 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 PPIL6Q8IXY8 311 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 SLC22A18ASQ8N1D0 253 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 PELI3Q8N2H9 469 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 NAT8LQ8N9F0 302 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 TRIM51Q9BSJ1 452 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 ZSCAN5AQ9BUG6 496 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 RIOK2Q9BVS4 552 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 BPIFA1Q9NP55 256 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 GDF3Q9NR23 364 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 PIH1D1Q9NWS0 290 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
PDLIM5-208ENST00000504489 SPTY2D1-AS1A0A0U1RR47 76 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 MROH6A6NGR9 719 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 SMAPO00193 183 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 RAD51CO43502 376 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 TMEM63AO94886 807 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 CER1O95813 267 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 SOD1P00441 154 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 SPAM1P38567 509 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 HADHAP40939 763 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 ZNF140P52738 457 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 THOP1P52888 689 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 NFATC4Q14934 902 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 HLA-BQ31612 363 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 IZUMO3Q5VZ72 239 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 RAET1GQ6H3X3 334 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 KDM7AQ6ZMT4 941 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 MACC1Q6ZN28 852 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 CAND1Q86VP6 1230 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 HEATR4Q86WZ0 1026 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 OXR1Q8N573 874 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 TRAM1L1Q8N609 369 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 OR4K2Q8NGD2 314 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 STYXQ8WUJ0 223 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 PEX13Q92968 403 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 FUBP1Q96AE4 644 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 ERP44Q9BS26 406 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 IL22Q9GZX6 179 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 WDR26Q9H7D7 661 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 XAB2Q9HCS7 855 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 IL26Q9NPH9 171 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 FSCN3Q9NQT6 498 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 PHPT1Q9NRX4 125 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 BFARQ9NZS9 450 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 RIMKLBQ9ULI2 386 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 OR1A2Q9Y585 309 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 KCTD3Q9Y597 815 aa11.84□□□□□ -0.51
PDLIM5-208ENST00000504489 COL5A1P20908 1838 aaPredicted RBP11.83□□□□□ -0.51
PDLIM5-208ENST00000504489 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 EFCAB8A8MWE9 144 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 FADS2P1A8MWK0 482 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 H7C0S8 307 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CACNB4O00305 520 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 NDC80O14777 642 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 BUD23O43709 281 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 ZNF883P0CG24 379 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CTAGE8P0CG41 777 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 MYCLP1P12525 358 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 KELP23276 732 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 HTR1BP28222 390 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 MAGEA3P43357 314 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 RXRGP48443 463 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 ATXN3P54252 364 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 TERF1P54274 439 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 PRSS12P56730 875 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 SESN2P58004 480 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CDK3Q00526 305 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms