RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 POLG2Q9UHN1 485 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 CNOT11Q9UKZ1 510 aaKnown RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 RIMKLBQ9ULI2 386 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 CNOT6Q9ULM6 557 aaKnown RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 LZTS1Q9Y250 596 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 TET1Q8NFU7 2136 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 MOXD2PA6NHM9 499 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 ZNF839A8K0R7 811 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 NT5C1B-RDH14C9J2C7 533 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 H3BNC9 293 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 NME4O00746 187 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 LINC00032P0C843 101 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SLC7A1P30825 629 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SLC11A1P49279 550 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SCNN1BP51168 640 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SGSHP51688 502 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 ECT2LQ008S8 904 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 TSNQ15631 228 aaKnown RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 VPS26BQ4G0F5 336 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 ACBD5Q5T8D3 534 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 GLT6D1Q7Z4J2 308 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 RNF180Q86T96 592 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 TMEM173Q86WV6 379 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 KIAA1191Q96A73 305 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 ROPN1LQ96C74 230 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 DUS3LQ96G46 650 aaKnown RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 PSKH2Q96QS6 385 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 GPATCH1Q9BRR8 931 aaKnown RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SPON2Q9BUD6 331 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 CINPQ9BW66 212 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 DERL2Q9GZP9 239 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 MAGEH1Q9H213 219 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SEMA4BQ9NPR2 832 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 GALPQ9UBC7 116 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 UBA2Q9UBT2 640 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SEPT3Q9UH03 358 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 RNF112Q9ULX5 631 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 SNX13Q9Y5W8 968 aa9.82□□□□□ -0.84
CLIP1-204ENST00000501271 A0A1B0GTW7 788 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SLC38A8A6NNN8 435 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 BBIP1A8MTZ0 92 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 FXYD1O00168 92 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CDC7O00311 574 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 TBC1D4O60343 1298 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ACSL4O60488 711 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ECI2O75521 394 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 GJB5O95377 273 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 TNFAIP8O95379 198 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SLC34A2O95436 690 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CLPTM1O96005 669 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 PRLP01236 227 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ATP6V1B1P15313 513 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CHRM3P20309 590 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CLCQ05315 142 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 LCP2Q13094 533 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 IKBKEQ14164 716 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 FUT10Q6P4F1 479 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 IYDQ6PHW0 289 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 AFTPHQ6ULP2 937 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 EP400NLQ6ZTU2 488 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 AMIGO2Q86SJ2 522 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 DHFR2Q86XF0 187 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CHERPQ8IWX8 916 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ABI1Q8IZP0 508 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 MIER2Q8N344 545 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 FBXO39Q8N4B4 442 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 PCYOX1LQ8NBM8 494 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 TUBGCP3Q96CW5 907 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 RMDN1Q96DB5 314 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ZNF597Q96LX8 424 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CASD1Q96PB1 797 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 UHRF1Q96T88 793 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 PRPF18Q99633 342 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 GPR21Q99679 349 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SLC30A3Q99726 388 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 EPB41L1Q9H4G0 881 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ZNF696Q9H7X3 374 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 RNF186Q9NXI6 227 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 TAS2R13Q9NYV9 303 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SMIM31A0A1B0GVY4 71 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 LCHNA4D1U4 455 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 NPEPPSL1A6NEC2 478 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 INSIG1O15503 277 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 RPS17P08708 135 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 FAM58BPP0C7Q3 252 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 HGFP14210 728 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CR2P20023 1033 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 PRDX3P30048 256 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 GRIA3P42263 894 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 TM4SF4P48230 202 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ILF2Q12905 390 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CAPRIN1Q14444 709 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 PSAPL1Q6NUJ1 521 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 PRSS55Q6UWB4 352 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 TAS1R1Q7RTX1 841 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 PIANPQ8IYJ0 282 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 BBS5Q8N3I7 341 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 RIN3Q8TB24 985 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 STAG3L4Q8TBR4 150 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 FUBP1Q96AE4 644 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms