RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 LILRB5O75023 590 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 RHOBTB1O94844 696 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 VAPBO95292 243 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 TTC4O95801 387 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 GOT2P00505 430 aaKnown RBP13.5□□□□□ -0.25
CPNE1-227ENST00000498056 FAM153BP0C7A2 387 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 TSHRP16473 764 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 CD27P26842 260 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 MAOBP27338 520 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 NUDT1P36639 197 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 CHRNA6Q15825 494 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 FAM153CQ494X1 144 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 WDR45BQ5MNZ6 344 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 ARMC3Q5W041 872 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 GCNT7Q6ZNI0 430 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 HEATR4Q86WZ0 1026 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 CCNJLQ8IV13 435 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 PALM2Q8IXS6 379 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 RAVER1Q8IY67 606 aaKnown RBP13.5□□□□□ -0.25
CPNE1-227ENST00000498056 PELI3Q8N2H9 469 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 TRAM1L1Q8N609 369 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 EIF1ADQ8N9N8 165 aaKnown RBP13.5□□□□□ -0.25
CPNE1-227ENST00000498056 PLA2G15Q8NCC3 412 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 MYRIPQ8NFW9 859 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 GSDMBQ8TAX9 411 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 PEX13Q92968 403 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 HDAC10Q969S8 669 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.25
CPNE1-227ENST00000498056 TBATAQ96M53 351 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 AGAP2Q99490 1192 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 ZSCAN5AQ9BUG6 496 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 PARD6BQ9BYG5 372 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 CDH19Q9H159 772 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 WDR26Q9H7D7 661 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 EBF2Q9HAK2 575 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 IL26Q9NPH9 171 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 MBNL1Q9NR56 388 aaKnown RBP13.5□□□□□ -0.25
CPNE1-227ENST00000498056 KCTD5Q9NXV2 234 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 NINJ2Q9NZG7 142 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 APPL1Q9UKG1 709 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 RIMKLBQ9ULI2 386 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 CACNA1EQ15878 2313 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 MAGEB16A2A368 324 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 A6NNZ2 444 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 FADS2P1A8MWK0 482 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 GOLGA8KD6RF30 607 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 PRAMEF26H0Y7S4 382 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 GOLGA8TH3BQL2 631 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 SRP72O76094 671 aaKnown RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ACSL3O95573 720 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 SOD1P00441 154 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ITPKAP23677 461 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 SSTR1P30872 391 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 CREB5Q02930 508 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ACVR1Q04771 509 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 PEX6Q13608 980 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ITGA9Q13797 1035 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 SLMAPQ14BN4 828 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 AGERQ15109 404 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 STEAP4Q687X5 459 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ZNF470Q6ECI4 717 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 LAYNQ6UX15 382 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 TMEM135Q86UB9 458 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 TRIM74Q86UV6 250 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 UNC5BQ8IZJ1 945 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 CBARPQ8N350 705 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 GDAP1Q8TB36 358 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ASB12Q8WXK4 309 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 CERS2Q96G23 380 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 CDKN2AIPNLQ96HQ2 116 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 FCRL3Q96P31 734 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 LENG8Q96PV6 779 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 KLF6Q99612 283 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 FAM96AQ9H5X1 160 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ASB8Q9H765 288 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 PPANQ9NQ55 473 aaKnown RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 CATSPERZQ9NTU4 200 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 C20orf96Q9NUD7 363 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-227ENST00000498056 RAB23Q9ULC3 237 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 PCDH15Q96QU1 1955 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 CACNA1HO95180 2353 aa13.49□□□□□ -0.25
CPNE1-227ENST00000498056 ZCWPW2A0A1B0GU75 182 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 C10orf142B7Z368 130 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 H7C0S8 307 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 PYGLP06737 847 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 ARNTP27540 789 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 AKT1P31749 480 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 FOXN2P32314 431 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 XIAPP98170 497 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 CACNG1Q06432 222 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 DPTQ07507 201 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 TCF15Q12870 199 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 NFATC2Q13469 925 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms