RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 NAPGQ99747 312 aaPredicted RBP15.27■□□□□ 0.04
NUP50-219ENST00000497960 FRMD8Q9BZ67 464 aaPredicted RBP15.27■□□□□ 0.04
NUP50-219ENST00000497960 TMEM168Q9H0V1 697 aa15.27■□□□□ 0.04
NUP50-219ENST00000497960 GLOD4Q9HC38 313 aa15.27■□□□□ 0.04
NUP50-219ENST00000497960 RAXQ9Y2V3 346 aa15.27■□□□□ 0.04
NUP50-219ENST00000497960 PKD1L2Q7Z442 2459 aa15.27■□□□□ 0.03
NUP50-219ENST00000497960 MYLKQ15746 1914 aa15.27■□□□□ 0.03
NUP50-219ENST00000497960 CTAGE9A4FU28 777 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 CEP104O60308 925 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 CSO75390 466 aaKnown RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 PTPN3P26045 913 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 GNPDA1P46926 289 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 OTUD4Q01804 1114 aaKnown RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 CDK18Q07002 472 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 GALNT3Q14435 633 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 NOMO1Q15155 1222 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 SLC14A2Q15849 920 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 PCSK7Q16549 785 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 DOK6Q6PKX4 331 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 RBM44Q6ZP01 1051 aaKnown RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 KDELC2Q7Z4H8 507 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 ZC3H18Q86VM9 953 aaKnown RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 GRAMD1AQ96CP6 724 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 HIC2Q96JB3 615 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 TEKT5Q96M29 485 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 C16orf45Q96MC5 204 aaPredicted RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 CCDC3Q9BQI4 270 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 RIOK2Q9BVS4 552 aaKnown RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 GSDMCQ9BYG8 508 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 DPEP2Q9H4A9 486 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 SYNDIG1Q9H7V2 258 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 TRNAU1APQ9NX07 287 aaKnown RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.26■□□□□ 0.03
NUP50-219ENST00000497960 PKD2L2Q9NZM6 624 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 SUFUQ9UMX1 484 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 SLC17A4Q9Y2C5 497 aa15.26■□□□□ 0.03
NUP50-219ENST00000497960 RGSL1A5PLK6 1076 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 HACD1B0YJ81 288 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 TCEA3O75764 348 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 SOD1P00441 154 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 IVLP07476 585 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 TNNT3P45378 269 aaPredicted RBP15.25■□□□□ 0.03
NUP50-219ENST00000497960 SPINT3P49223 89 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 PEX6Q13608 980 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 SPIDRQ14159 915 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 ISXQ2M1V0 245 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 FAM182AQ5T1J6 154 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 OGFOD3Q6PK18 319 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 SLC13A5Q86YT5 568 aaPredicted RBP15.25■□□□□ 0.03
NUP50-219ENST00000497960 TTC13Q8NBP0 860 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 GPR156Q8NFN8 814 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 CCL4L1Q8NHW4 92 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 ACTL9Q8TC94 416 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 GPBAR1Q8TDU6 330 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 CCDC74AQ96AQ1 378 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 OSBPL9Q96SU4 736 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 VAT1Q99536 393 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 FAM118BQ9BPY3 351 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 FAM83DQ9H4H8 585 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 ZFYVE1Q9HBF4 777 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 KLHL8Q9P2G9 620 aaPredicted RBP15.25■□□□□ 0.03
NUP50-219ENST00000497960 SNX12Q9UMY4 172 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 PCDHB1Q9Y5F3 818 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 LRP4O75096 1905 aa15.25■□□□□ 0.03
NUP50-219ENST00000497960 ARHGEF17Q96PE2 2063 aaPredicted RBP15.24■□□□□ 0.03
NUP50-219ENST00000497960 FAM208BQ5VWN6 2430 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 B4DGG1 531 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 H7C0C1 242 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 INPP4BO15327 924 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 USP12O75317 370 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 PMPCBO75439 489 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 NDST3O95803 873 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 FGGP02679 453 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 ATP5OP48047 213 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 POLD2P49005 469 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 KLF1Q13351 362 aaPredicted RBP15.24■□□□□ 0.03
NUP50-219ENST00000497960 CDKL3Q8IVW4 592 aaPredicted RBP15.24■□□□□ 0.03
NUP50-219ENST00000497960 SPATA22Q8NHS9 363 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 HTR3CQ8WXA8 447 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 TADA1Q96BN2 335 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 PBKQ96KB5 322 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 QKIQ96PU8 341 aaKnown RBP eCLIP15.24■□□□□ 0.03
NUP50-219ENST00000497960 TRIB3Q96RU7 358 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 SRPK1Q96SB4 655 aaKnown RBP15.24■□□□□ 0.03
NUP50-219ENST00000497960 AGAP2Q99490 1192 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 FERMT1Q9BQL6 677 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 CDH19Q9H159 772 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 MAGEE1Q9HCI5 957 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 RAD18Q9NS91 495 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 FAM153AQ9UHL3 310 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 TMEM98Q9Y2Y6 226 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 GPSM3Q9Y4H4 160 aa15.24■□□□□ 0.03
NUP50-219ENST00000497960 TCRBV7S2A1N4TA0A589 114 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 NOBOXO60393 691 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 BRINP1O60477 761 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 ASMTLO95671 621 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 MT-CYBP00156 380 aaPredicted RBP15.23■□□□□ 0.03
NUP50-219ENST00000497960 FUCA1P04066 466 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 GLB1P16278 677 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 TCP1P17987 556 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms