RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 USP7Q93009 1102 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 SCAMP4Q969E2 229 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 FAF2Q96CS3 445 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 MED8Q96G25 268 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 MAK16Q9BXY0 300 aaKnown RBP12.32□□□□□ -0.44
VPS72-206ENST00000496809 SEMA6CQ9H3T2 930 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 RMI1Q9H9A7 625 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 RDH14Q9HBH5 336 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 KCNK4Q9NYG8 393 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 PKD2L2Q9NZM6 624 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 VPS18Q9P253 973 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 CD84Q9UIB8 345 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 CHKBQ9Y259 395 aa12.32□□□□□ -0.44
VPS72-206ENST00000496809 PRAMEF33A0A0G2JMD5 474 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 C1orf232A0A0U1RR37 186 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 SSU72P8A0A1W2PR75 194 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ZNF487B1APH4 448 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ANKRD66B4E2M5 251 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 AKR1B10O60218 316 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 SOD1P00441 154 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ITGB2P05107 769 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ITIH1P19827 911 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 KDELR1P24390 212 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 CD1CP29017 333 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 CSTF2P33240 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
VPS72-206ENST00000496809 ARHGAP25P42331 645 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 FASLGP48023 281 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 LIMK2P53671 638 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ODF2Q5BJF6 829 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 SFTPA2Q8IWL1 248 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 AVL9Q8NBF6 648 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 AGBL5Q8NDL9 886 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 LPCAT1Q8NF37 534 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 OR10G6Q8NH81 332 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ARRDC2Q8TBH0 407 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.31□□□□□ -0.44
VPS72-206ENST00000496809 SH3KBP1Q96B97 665 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 SGF29Q96ES7 293 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 AHCYL2Q96HN2 611 aaKnown RBP12.31□□□□□ -0.44
VPS72-206ENST00000496809 COX14Q96I36 57 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 TAAR9Q96RI9 348 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ARHGAP9Q9BRR9 750 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 MLPHQ9BV36 600 aaPredicted RBP12.31□□□□□ -0.44
VPS72-206ENST00000496809 RIOK2Q9BVS4 552 aaKnown RBP12.31□□□□□ -0.44
VPS72-206ENST00000496809 FAM83DQ9H4H8 585 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 RAD18Q9NS91 495 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 ZNHIT2Q9UHR6 403 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 TMEM98Q9Y2Y6 226 aa12.31□□□□□ -0.44
VPS72-206ENST00000496809 KALRNO60229 2985 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 IGHV5-10-1A0A0J9YXX1 117 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 INPP4BO15327 924 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 EFSO43281 561 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 CLDN7O95471 211 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 PRLP01236 227 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 HLA-DQB2P05538 268 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 SFTPCP11686 197 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 ZFXP17010 805 aaPredicted RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 PPM1FP49593 454 aaPredicted RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 ATP1A2P50993 1020 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 IFI35P80217 286 aaPredicted RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 GBE1Q04446 702 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 PPIDQ08752 370 aaKnown RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 LY6DQ14210 128 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 PDK1Q15118 436 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 PTPRRQ15256 657 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 KIAA1614Q5VZ46 1190 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 TMEM71Q6P5X7 295 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 RHOT2Q8IXI1 618 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 PQLC3Q8N755 202 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 RNF157Q96PX1 679 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 SRPK1Q96SB4 655 aaKnown RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 DNAJC7Q99615 494 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 SLC38A3Q99624 504 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 ASPSCR1Q9BZE9 553 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 XPO4Q9C0E2 1151 aaKnown RBP12.3□□□□□ -0.44
VPS72-206ENST00000496809 ZMYND15Q9H091 742 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 BRD8Q9H0E9 1235 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 DTLQ9NZJ0 730 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 NENFQ9UMX5 172 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 PCDHGA3Q9Y5H0 932 aa12.3□□□□□ -0.44
VPS72-206ENST00000496809 LRRD1A4D1F6 860 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 B8ZZF3 427 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 C9orf172C9J069 976 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 J3QKU1 62 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 PPP1R12AO14974 1030 aaPredicted RBP12.29□□□□□ -0.44
VPS72-206ENST00000496809 PPM1DO15297 605 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 DUX1O43812 170 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 MAP3K6O95382 1288 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 JCHAINP01591 159 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 PLA2G2AP14555 144 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 CD86P42081 329 aa12.29□□□□□ -0.44
VPS72-206ENST00000496809 SPINT3P49223 89 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms