RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 SH3KBP1Q96B97 665 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 NXPE2Q96DL1 559 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 SCARF2Q96GP6 870 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-214ENST00000496633 TTC25Q96NG3 672 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 DEPDC7Q96QD5 511 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 VPS35Q96QK1 796 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 LRRC61Q9BV99 259 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 SPATA16Q9BXB7 569 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 FRMD8Q9BZ67 464 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-214ENST00000496633 NRSN2Q9GZP1 204 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 LRRC40Q9H9A6 602 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 CARS2Q9HA77 564 aaKnown RBP7.56□□□□□ -1.2
CDHR3-214ENST00000496633 TRIM39Q9HCM9 518 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 CYP4F12Q9HCS2 524 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 TOR4AQ9NXH8 423 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 AKAP7Q9P0M2 348 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-214ENST00000496633 SAE1Q9UBE0 346 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-214ENST00000496633 DKK4Q9UBT3 224 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 MOSPD1Q9UJG1 213 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 CLCA2Q9UQC9 943 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 ZNF711Q9Y462 761 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 JRKLQ9Y4A0 524 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 CAPN6Q9Y6Q1 641 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 CEP295Q9C0D2 2601 aa7.56□□□□□ -1.2
CDHR3-214ENST00000496633 TMEM202A6NGA9 273 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GOLGA8CPA6NN73 597 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 TRIM38O00635 465 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 STX7O15400 261 aaKnown RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 DDX3YO15523 660 aaKnown RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 NUDT21O43809 227 aaKnown RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 HYAL3O43820 417 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 KIF5CO60282 957 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 SLC25A14O95258 325 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 ASMTLO95671 621 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 MT-CYBP00156 380 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 PRKCGP05129 697 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 PROS1P07225 676 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 RALBP11234 206 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 LPOP22079 712 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 FDFT1P37268 417 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 SPAM1P38567 509 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GPR3P46089 330 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 MARCKSL1P49006 195 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 SARNPP82979 210 aaKnown RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 EIF3IQ13347 325 aaKnown RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GTF2H3Q13889 308 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GALNT3Q14435 633 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 TAF1AQ15573 450 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 CDKN3Q16667 212 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 DEFB133Q30KQ1 61 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 ZNF542PQ5EBM4 170 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 LDLRAP1Q5SW96 308 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 OGFOD3Q6PK18 319 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 KDELC1Q6UW63 502 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 UNQ6494/PRO21346Q6UXR6 183 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 RD3Q7Z3Z2 195 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GLT6D1Q7Z4J2 308 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 TSPAN33Q86UF1 283 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 SLCO6A1Q86UG4 719 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 SLC13A5Q86YT5 568 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 CHCHD4Q8N4Q1 142 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 BEND7Q8N7W2 519 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 CCDC89Q8N998 374 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 PLA2G15Q8NCC3 412 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 IPMKQ8NFU5 416 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 SLC35B2Q8TB61 432 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 IFI44Q8TCB0 444 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 MAPK15Q8TD08 544 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GPBAR1Q8TDU6 330 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 ALG3Q92685 438 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 PEX13Q92968 403 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GLYATL1Q969I3 302 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 TSACCQ96A04 125 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 RTP4Q96DX8 246 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 COX14Q96I36 57 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 PBKQ96KB5 322 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 OR2M4Q96R27 311 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 TTC1Q99614 292 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 HERPUD2Q9BSE4 406 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 RIOK2Q9BVS4 552 aaKnown RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 CEP41Q9BYV8 373 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 DPEP2Q9H4A9 486 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 EPB41L1Q9H4G0 881 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 ARNT2Q9HBZ2 717 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 FGF22Q9HCT0 170 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 LZTFL1Q9NQ48 299 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 UCKL1Q9NWZ5 548 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 PADI4Q9UM07 663 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 TFR2Q9UP52 801 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 GPR34Q9UPC5 381 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 WASF3Q9UPY6 502 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 ZNF148Q9UQR1 794 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 DRG1Q9Y295 367 aaKnown RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 PPP2R2CQ9Y2T4 447 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-214ENST00000496633 LRRK1Q38SD2 2015 aa7.55□□□□□ -1.2
CDHR3-214ENST00000496633 ACACBO00763 2458 aa7.54□□□□□ -1.2
CDHR3-214ENST00000496633 CFAP99D6REC4 459 aa7.54□□□□□ -1.2
CDHR3-214ENST00000496633 E7EVH7 732 aa7.54□□□□□ -1.2
CDHR3-214ENST00000496633 QSOX1O00391 747 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms