RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 USP17L6PQ6QN14 398 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 TNS4Q8IZW8 715 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 SRFBP1Q8NEF9 429 aaKnown RBP8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 FLAD1Q8NFF5 587 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 KAT5Q92993 513 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 AURKBQ96GD4 344 aaPredicted RBP8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 MED28Q9H204 178 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 TTYH1Q9H313 450 aaPredicted RBP8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 RIBC2Q9H4K1 309 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 TMEM8AQ9HCN3 771 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 PAK6Q9NQU5 681 aaPredicted RBP8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 C14orf119Q9NWQ9 140 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 TMEM181Q9P2C4 612 aa8.17□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF98A6NK75 572 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 APOC4-APOC2K7ER74 178 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 BCKDKO14874 412 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 NUPL2O15504 423 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 INMTO95050 263 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 TGM6O95932 706 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SERPINA1P01009 418 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 FOSP01100 380 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 APOC2P02655 101 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 HTR1BP28222 390 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ALDH3A2P51648 485 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 KLF1Q13351 362 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ATP6AP1Q15904 470 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 BMT2Q1RMZ1 405 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 MSS51Q4VC12 460 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 LCN1P1Q5VSP4 162 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 LIPMQ5VYY2 423 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SHQ1Q6PI26 577 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 GADL1Q6ZQY3 521 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 LINC00518Q8N0U6 118 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 BEND7Q8N7W2 519 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 LRRC15Q8TF66 581 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SHC3Q92529 594 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM162AQ96A26 154 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SHISA4Q96DD7 197 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 RDH12Q96NR8 316 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 GFM1Q96RP9 751 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ZBTB18Q99592 522 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 FEM1AQ9BSK4 669 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SOX17Q9H6I2 414 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 STARD7Q9NQZ5 370 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 PRR12Q9ULL5 1215 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 PNMA6FA0A0J9YX94 578 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 C2orf74A8MZ97 194 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 C9IYK1 514 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 RECQL5O94762 991 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 TMEM63AO94886 807 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ADORA2AP29274 412 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 HLA-FP30511 346 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 L1CAMP32004 1257 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 RFC4P35249 363 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 CTSKP43235 329 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 IRF5Q13568 498 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ATP13A4Q4VNC1 1196 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SETMARQ53H47 684 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 DGKKQ5KSL6 1271 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF57Q68EA5 555 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ARHGAP17Q68EM7 881 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 GLYATQ6IB77 296 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 RRM2BQ7LG56 351 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 PRSS42Q7Z5A4 293 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ZBTB44Q8NCP5 570 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ST8SIA4Q92187 359 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ZSWIM3Q96MP5 696 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 GINS4Q9BRT9 223 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 PELOQ9BRX2 385 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 TRPM5Q9NZQ8 1165 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC39A10Q9ULF5 831 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 RIMKLBQ9ULI2 386 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 GMPPBQ9Y5P6 360 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 RFPL1O75677 317 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 GABARAPO95166 117 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 DHFRP00374 187 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 CDK1P06493 297 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 RPS17P08708 135 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 SRCP12931 536 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 NCAM1P13591 858 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 HOXB1P14653 301 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 DNAJB2P25686 324 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 CYP2C18P33260 490 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 MEP1AQ16819 746 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM83EQ2M2I3 478 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 PTPN20Q4JDL3 420 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 STON2Q8WXE9 905 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 CCDC126Q96EE4 140 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 TMEM80Q96HE8 168 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 CPNE1Q99829 537 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 EBNA1BP2Q99848 306 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 DCP1AQ9NPI6 582 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 BIN3Q9NQY0 253 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 ACTR10Q9NZ32 417 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 KCND2Q9NZV8 630 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 PCDHA11Q9Y5I1 949 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 NFASCO94856 1347 aa8.16□□□□□ -1.1
CRNKL1-205ENST00000496549 TCRBV3S1A0A5B6 114 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 MYO1GB0I1T2 1018 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms