RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 AP4E1Q9UPM8 1137 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 NDUFAF1Q9Y375 327 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 SLC16A4O15374 487 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 LRPAP1P30533 357 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 NDST1P52848 882 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 GRB14Q14449 540 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 SPANXN3Q5MJ09 141 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 OSTM1Q86WC4 334 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 TNS4Q8IZW8 715 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 MPP5Q8N3R9 675 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 DCLK2Q8N568 766 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 SETD6Q8TBK2 473 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 SLC22A17Q8WUG5 538 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ST6GAL2Q96JF0 529 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 TSNARE1Q96NA8 513 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ZNF577Q9BSK1 485 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 FEM1AQ9BSK4 669 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 TRAF4Q9BUZ4 470 aaPredicted RBP9.05□□□□□ -0.96
HPS4-217ENST00000496385 AASDHPPTQ9NRN7 309 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ATPIF1Q9UII2 106 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 MKLN1Q9UL63 735 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 VANGL2Q9ULK5 521 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 MCM3APO60318 1980 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 A0A096LPK6 155 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 PNMA8CA0A1B0GUJ8 204 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 A0A1W2PQ72 361 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 FAM149AA5PLN7 773 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 HMX3A6NHT5 357 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 UBDO15205 165 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 CAPN1P07384 714 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 THRBP10828 461 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 NRLP54845 237 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 ACTR2P61160 394 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 B2MP61769 119 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 MVKQ03426 396 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 CARTPTQ16568 116 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 HSDL1Q3SXM5 330 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 AGKQ53H12 422 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 RBM20Q5T481 1227 aaKnown RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 HDDC2Q7Z4H3 204 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 LURAP1LQ8IV03 231 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 METTL4Q8N3J2 472 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 TMEM161BQ8NDZ6 487 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 CHST13Q8NET6 341 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 OR5H6Q8NGV6 325 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 MCFD2Q8NI22 146 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 GABPB2Q8TAK5 448 aaPredicted RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 RORBQ92753 470 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 NXNL1Q96CM4 212 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 ACE2Q9BYF1 805 aaPredicted RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 MCOLN1Q9GZU1 580 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 TOR4AQ9NXH8 423 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 IL37Q9NZH6 218 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 SLCO3A1Q9UIG8 710 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 USP18Q9UMW8 372 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 CLDN24A6NM45 220 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 H0Y858 1186 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 TBC1D4O60343 1298 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 HTR1AP08908 422 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 MIPP30301 263 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 SHMT2P34897 504 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 RPS5P46782 204 aaKnown RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 ARSFP54793 590 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 GJA9P57773 515 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 IL18R1Q13478 541 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 DAG1Q14118 895 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 GEN1Q17RS7 908 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 DPY19L1Q2PZI1 675 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 ZNF404Q494X3 552 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 COQ5Q5HYK3 327 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 CATSPEREQ5SY80 951 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 SYT6Q5T7P8 510 aaPredicted RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 GDPD3Q7L5L3 318 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 STRADAQ7RTN6 431 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 ZBTB33Q86T24 672 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 NOXA1Q86UR1 476 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 PTRH1Q86Y79 214 aaKnown RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 PLCZ1Q86YW0 608 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 SPPL2CQ8IUH8 684 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 PLD6Q8N2A8 252 aaKnown RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 FBXL6Q8N531 539 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 PLD5Q8N7P1 536 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 LHFPL5Q8TAF8 219 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 AGR3Q8TD06 166 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 BRSK1Q8TDC3 778 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 BLOC1S5Q8TDH9 187 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 TAAR1Q96RJ0 339 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 CNPY3Q9BT09 278 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 DGCR6LQ9BY27 220 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 LHX5Q9H2C1 402 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 KCNN2Q9H2S1 579 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 LIN7BQ9HAP6 207 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 ZNF358Q9NW07 568 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 ADPRHL2Q9NX46 363 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 STAP1Q9ULZ2 295 aa9.04□□□□□ -0.96
HPS4-217ENST00000496385 VPS4AQ9UN37 437 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms