RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
CXCL12-208ENST00000496375 PISDQ9UG56 409 aa14.36□□□□□ -0.11
CXCL12-208ENST00000496375 PHTF1Q9UMS5 762 aa14.36□□□□□ -0.11
CXCL12-208ENST00000496375 PPP2R2CQ9Y2T4 447 aa14.36□□□□□ -0.11
CXCL12-208ENST00000496375 LOXL2Q9Y4K0 774 aa14.36□□□□□ -0.11
CXCL12-208ENST00000496375 AHCTF1Q8WYP5 2266 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 GOLGA6CA6NDK9 693 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 GOLGA6BA6NDN3 693 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 NPIPB15A6NHN6 443 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 CEACAM5P06731 702 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 GOLGA6DP0CG33 693 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 CYP2A6P11509 494 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 PLA2G2AP14555 144 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 CCNB1P14635 433 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 MX2P20592 715 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 ETV3P41162 512 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 MMP13P45452 471 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 NAP1L1P55209 391 aaKnown RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 GBE1Q04446 702 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 ZFP36L1Q07352 338 aaKnown RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 SLC10A2Q12908 348 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 TFDP2Q14188 446 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 ZFYVE27Q5T4F4 411 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 MARC1Q5VT66 337 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 RAET1GQ6H3X3 334 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 HSD11B1LQ7Z5J1 315 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 TEX26Q8N6G2 289 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 GPBAR1Q8TDU6 330 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 ALG3Q92685 438 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 DTD2Q96FN9 168 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 CCNL2Q96S94 520 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 TEX101Q9BY14 249 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 SEMA4CQ9C0C4 833 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 SPATS2LQ9NUQ6 558 aaKnown RBP14.35□□□□□ -0.11
CXCL12-208ENST00000496375 GOLGA6AQ9NYA3 693 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 AMACRQ9UHK6 382 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 AMFRQ9UKV5 643 aa14.35□□□□□ -0.11
CXCL12-208ENST00000496375 COL6A6A6NMZ7 2263 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 CAPN8A6NHC0 703 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 PSMD11O00231 422 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 APOL1O14791 398 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 DDX3YO15523 660 aaKnown RBP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 NUDT21O43809 227 aaKnown RBP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 PGLSO95336 258 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 ZIC2O95409 532 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 FUCA1P04066 466 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 CTPS1P17812 591 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 ITIH1P19827 911 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 CCNCP24863 283 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 GNPDA1P46926 289 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 NR2C2P49116 596 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 MAZP56270 477 aaKnown RBP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 RWDD2BP57060 319 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 CDK3Q00526 305 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 ILF3Q12906 894 aaKnown RBP eCLIP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 LY6DQ14210 128 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 PTPRRQ15256 657 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 RALGPS1Q5JS13 557 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 ARMC12Q5T9G4 340 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 ALG1LQ6GMV1 187 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 TIGD7Q6NT04 549 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 Q6ZVL8 140 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 BBS12Q6ZW61 710 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 TMPRSS9Q7Z410 1059 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 PEX26Q7Z412 305 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 TSPAN33Q86UF1 283 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 NRROSQ86YC3 692 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 CBARPQ8N350 705 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 ZDHHC1Q8WTX9 485 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 SCRN2Q96FV2 425 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 GSDMCQ9BYG8 508 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 FRMD8Q9BZ67 464 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-208ENST00000496375 BRD8Q9H0E9 1235 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 NT5MQ9NPB1 228 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 GUCA1BQ9UMX6 200 aa14.34□□□□□ -0.11
CXCL12-208ENST00000496375 RHPN2P1A8MT19 583 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 NVLO15381 856 aaKnown RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 FGF1P05230 155 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 TNNT1P13805 278 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 AK4P27144 223 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 B4GALNT1Q00973 533 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 PPIDQ08752 370 aaKnown RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 TGIF1Q15583 401 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 MAP9Q49MG5 647 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 ODF2Q5BJF6 829 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 PHF19Q5T6S3 580 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 USP45Q70EL2 814 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 SLITRK4Q8IW52 837 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 UBL4BQ8N7F7 174 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 PTCD2Q8WV60 388 aaKnown RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 TMEM159Q96B96 161 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 MCCC1Q96RQ3 725 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 CMKLR1Q99788 373 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 MAK16Q9BXY0 300 aaKnown RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 SEMA6CQ9H3T2 930 aa14.33□□□□□ -0.12
CXCL12-208ENST00000496375 TRNAU1APQ9NX07 287 aaKnown RBP14.33□□□□□ -0.12
CXCL12-208ENST00000496375 TAAR2Q9P1P5 351 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms