RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 ABLIM3O94929 683 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 CRTAMO95727 393 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 ATP5F1P24539 256 aaPredicted RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 CTNNB1P35222 781 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 LEPRP48357 1165 aaKnown RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 MAPKAPK2P49137 400 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 DSG1Q02413 1049 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 SULT2A1Q06520 285 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 NAB1Q13506 487 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 TEAD2Q15562 447 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 RBBP7Q16576 425 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 FUT11Q495W5 492 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 Q6ZVU0 165 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 CCDC117Q8IWD4 279 aaPredicted RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 TUBGCP3Q96CW5 907 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 LINGO1Q96FE5 620 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 TDRD1Q9BXT4 1180 aaKnown RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 ASB8Q9H765 288 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 LATS2Q9NRM7 1088 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 COPG1Q9Y678 874 aaKnown RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 A0A088AWK7 358 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 FGF1P05230 155 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 ITGAXP20702 1163 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 SKIV2L2P42285 1042 aaKnown RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 MRPS22P82650 360 aaKnown RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 LMAN2Q12907 356 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 TECRLQ5HYJ1 363 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 DGKKQ5KSL6 1271 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 C6orf163Q5TEZ5 329 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 PTRHD1Q6GMV3 140 aaKnown RBP11.9□□□□□ -0.5
HCN3-204ENST00000496230 TMC5Q6UXY8 1006 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 CDYL2Q8N8U2 506 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 KDM1BQ8NB78 822 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 MKS1Q9NXB0 559 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 ZNHIT2Q9UHR6 403 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 TBX21Q9UL17 535 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 TRAF6Q9Y4K3 522 aa11.9□□□□□ -0.5
HCN3-204ENST00000496230 WASH4PA8MWX3 477 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 PLK4O00444 970 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 EN2P19622 333 aaPredicted RBP11.9□□□□□ -0.51
HCN3-204ENST00000496230 LPOP22079 712 aaPredicted RBP11.9□□□□□ -0.51
HCN3-204ENST00000496230 DNAJB1P25685 340 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 YBX1P67809 324 aaKnown RBP11.9□□□□□ -0.51
HCN3-204ENST00000496230 PRKAA1Q13131 559 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 RPS6KA2Q15349 733 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 FAM109BQ6ICB4 259 aaPredicted RBP11.9□□□□□ -0.51
HCN3-204ENST00000496230 ZSWIM3Q96MP5 696 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 TMEM175Q9BSA9 504 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 BBS2Q9BXC9 721 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 PKP3Q9Y446 797 aa11.9□□□□□ -0.51
HCN3-204ENST00000496230 UPK3BL1B0FP48 263 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 UPK3BL2E5RIL1 263 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 SLC7A4O43246 635 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 TLL1O43897 1013 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 TPST1O60507 370 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 PRAMEF1O95521 474 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 UBTFL6P0CB48 400 aaPredicted RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 HLA-DPA1P20036 260 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 MAGEA12P43365 314 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 STC1P52823 247 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 LBX1P52954 281 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 TIAL1Q01085 375 aaKnown RBP eCLIP11.89□□□□□ -0.51
HCN3-204ENST00000496230 CYLC2Q14093 348 aaPredicted RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 CAPRIN1Q14444 709 aaKnown RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 GRB7Q14451 532 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 GRASPQ7Z6J2 395 aaPredicted RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 TEX26Q8N6G2 289 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 SEMA6AQ9H2E6 1030 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 MFSD1Q9H3U5 465 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 NSMCE4AQ9NXX6 385 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 LNPEPQ9UIQ6 1025 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 AP3B1O00203 1094 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 LUC7L3O95232 432 aaKnown RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 F11P03951 625 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 ZCCHC18P0CG32 403 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 COL6A1P12109 1028 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 EPCAMP16422 314 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 KPNA1P52294 538 aaPredicted RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 FOXD4Q12950 439 aaPredicted RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 ZSWIM9Q86XI8 627 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 ADGRG2Q8IZP9 1017 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 CHST14Q8NCH0 376 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 UCMAQ8WVF2 138 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 FOXJ1Q92949 421 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 SCAMP4Q969E2 229 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 CMTM5Q96DZ9 223 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 EGFL8Q99944 293 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 MCMBPQ9BTE3 642 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 IGFLR1Q9H665 355 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 NMRK1Q9NWW6 199 aa11.89□□□□□ -0.51
HCN3-204ENST00000496230 HECAQ9UBI9 543 aaPredicted RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 EIF2B4Q9UI10 523 aaKnown RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 MBD1Q9UIS9 605 aaPredicted RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 INTS6Q9UL03 887 aaKnown RBP11.89□□□□□ -0.51
HCN3-204ENST00000496230 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
HCN3-204ENST00000496230 NR5A2O00482 541 aa11.88□□□□□ -0.51
HCN3-204ENST00000496230 CLASP2O75122 1294 aaKnown RBP11.88□□□□□ -0.51
HCN3-204ENST00000496230 SMIM24O75264 130 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms