RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 LIPMQ5VYY2 423 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 LRRC8EQ6NSJ5 796 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 Q6ZS52 159 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 CLNKQ7Z7G1 428 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 SLC41A1Q8IVJ1 513 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 PLD6Q8N2A8 252 aaKnown RBP16.24■□□□□ 0.19
CBX4-204ENST00000495122 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.24■□□□□ 0.19
CBX4-204ENST00000495122 OR6P1Q8NGX9 317 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 BLOC1S5Q8TDH9 187 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 OTUB2Q96DC9 234 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 TMEM237Q96Q45 408 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 RAB3IPQ96QF0 476 aaPredicted RBP16.24■□□□□ 0.19
CBX4-204ENST00000495122 CYP2S1Q96SQ9 504 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 OMDQ99983 421 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 FAM83CQ9BQN1 747 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 LRMDAQ9H2I8 198 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 CATSPERZQ9NTU4 200 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 TDP1Q9NUW8 608 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
CBX4-204ENST00000495122 DNAJC28Q9NX36 388 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 LNPEPQ9UIQ6 1025 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 HAO1Q9UJM8 370 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 DCTN4Q9UJW0 460 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.24■□□□□ 0.19
CBX4-204ENST00000495122 RAI2Q9Y5P3 530 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 THADAQ6YHU6 1953 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 DNAH14Q0VDD8 3507 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 CCDC78A2IDD5 438 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 SLCO1B7G3V0H7 640 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 H7C0S8 307 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 LEFTY2O00292 366 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 CD3EAPO15446 510 aaKnown RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 CD160O95971 181 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 S1PR4O95977 384 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 LTA4HP09960 611 aaKnown RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 LPOP22079 712 aaPredicted RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 KCNA4P22459 653 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 GLDCP23378 1020 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 CSKP41240 450 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 SUOXP51687 545 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 TAS2R39P59534 338 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 DNAJB13P59910 316 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 ZBTB16Q05516 673 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 USP4Q13107 963 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 CCINQ13939 588 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 DMC1Q14565 340 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 SPRED3Q2MJR0 410 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 AARS2Q5JTZ9 985 aaKnown RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 ASRGL1Q7L266 308 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 GLT6D1Q7Z4J2 308 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 KIAA2013Q8IYS2 634 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 CENPLQ8N0S6 344 aaPredicted RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 SPEM1Q8N4L4 309 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 GPATCH11Q8N954 259 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 OR4L1Q8NH43 312 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 DDI1Q8WTU0 396 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 ISG20Q96AZ6 181 aaKnown RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 KLHL29Q96CT2 875 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 RMDN1Q96DB5 314 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 CHFRQ96EP1 664 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 ABCB8Q9NUT2 735 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 TBC1D14Q9P2M4 693 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 HEY2Q9UBP5 337 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 RUVBL2Q9Y230 463 aaKnown RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 APOBEC2Q9Y235 224 aaKnown RBP16.23■□□□□ 0.19
CBX4-204ENST00000495122 VWA7Q9Y334 891 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 COMMD10Q9Y6G5 202 aa16.23■□□□□ 0.19
CBX4-204ENST00000495122 ANKRD66B4E2M5 251 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 TARM1B6A8C7 271 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 FZD6O60353 706 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 NPHS1O60500 1241 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 RASSF9O75901 435 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 TOP3BO95985 862 aaKnown RBP16.22■□□□□ 0.19
CBX4-204ENST00000495122 GOT2P00505 430 aaKnown RBP16.22■□□□□ 0.19
CBX4-204ENST00000495122 PRLP01236 227 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 MZF1P28698 734 aaPredicted RBP16.22■□□□□ 0.19
CBX4-204ENST00000495122 RGRP47804 291 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 ID4P47928 161 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 CXCL12P48061 93 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 STC1P52823 247 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 IRF9Q00978 393 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 RUNX3Q13761 415 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 GALNT3Q14435 633 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 ACAP2Q15057 778 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 DLG2Q15700 870 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 ZNF77Q15935 545 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 HECTD2Q5U5R9 776 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 TRIM68Q6AZZ1 485 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 CDKN2AIPNLQ96HQ2 116 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 DNAJC1Q96KC8 554 aaKnown RBP16.22■□□□□ 0.19
CBX4-204ENST00000495122 GPR78Q96P69 363 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 DRC3Q9H069 523 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 MAGEE1Q9HCI5 957 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 FBXO6Q9NRD1 293 aaPredicted RBP16.22■□□□□ 0.19
CBX4-204ENST00000495122 NCDNQ9UBB6 729 aa16.22■□□□□ 0.19
CBX4-204ENST00000495122 A0A1W2PQ67 120 aa16.21■□□□□ 0.19
CBX4-204ENST00000495122 OTOL1A6NHN0 477 aaPredicted RBP16.21■□□□□ 0.19
CBX4-204ENST00000495122 F8W8V4 182 aa16.21■□□□□ 0.19
CBX4-204ENST00000495122 K7ESF4 209 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms