RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 POLR1BQ9H9Y6 1135 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 GLOD4Q9HC38 313 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 EPB41L5Q9HCM4 733 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 ASCL3Q9NQ33 180 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 LRIT1Q9P2V4 623 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 AMACRQ9UHK6 382 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 CNOT6Q9ULM6 557 aaKnown RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 SLC17A4Q9Y2C5 497 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 NBEAQ8NFP9 2946 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ANKRD66B4E2M5 251 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 D6RAR5 112 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 PDE2AO00408 941 aaPredicted RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 PPP1R12AO14974 1030 aaPredicted RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 PSTPIP1O43586 416 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 PMPCBO75439 489 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 NDUFA10O95299 355 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ASMTLO95671 621 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ECEL1O95672 775 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 EML2O95834 649 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 IVLP07476 585 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ZFXP17010 805 aaPredicted RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 NFKB1P19838 968 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 NFKBIAP25963 317 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ACTN2P35609 894 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 CYLC1P35663 651 aaPredicted RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 ACTR1BP42025 376 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 LSSP48449 732 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 SPINT3P49223 89 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ACTR1AP61163 376 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 WASHC5Q12768 1159 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ILF3Q12906 894 aaKnown RBP eCLIP10.55□□□□□ -0.72
NELFE-213ENST00000494956 SPA17Q15506 151 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 AMZ1Q400G9 498 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 C14orf28Q4W4Y0 310 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 PYCR3Q53H96 274 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 TEX44Q53QW1 395 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 CERCAMQ5T4B2 595 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ADAMTSL4Q6UY14 1074 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ZNF761Q86XN6 746 aaPredicted RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 CCNJLQ8IV13 435 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 SPACA3Q8IXA5 215 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 GPR26Q8NDV2 337 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 ZDHHC1Q8WTX9 485 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 TADA1Q96BN2 335 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 MRFAP1L1Q96HT8 127 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 COX14Q96I36 57 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 HIC2Q96JB3 615 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 BBC3Q96PG8 261 aaPredicted RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 OR2M4Q96R27 311 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 GFM1Q96RP9 751 aaKnown RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 LYSMD1Q96S90 227 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 FAM118BQ9BPY3 351 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 GSDMCQ9BYG8 508 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 LACRTQ9GZZ8 138 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 RDH14Q9HBH5 336 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 TRIM10Q9UDY6 481 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 SPO11Q9Y5K1 396 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 EPN1Q9Y6I3 576 aaPredicted RBP10.55□□□□□ -0.72
NELFE-213ENST00000494956 ZFYVE26Q68DK2 2539 aa10.55□□□□□ -0.72
NELFE-213ENST00000494956 A0A0A6YYK5 440 aaPredicted RBP10.54□□□□□ -0.72
NELFE-213ENST00000494956 PPM1DO15297 605 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 B4GAT1O43505 415 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 DNAJC6O75061 913 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 TCEA3O75764 348 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 ZRANB2O95218 330 aaKnown RBP eCLIP10.54□□□□□ -0.72
NELFE-213ENST00000494956 GLB1P16278 677 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 CA4P22748 312 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 FECHP22830 423 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 TEAD1P28347 426 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 ALDH4A1P30038 563 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 CHRNA4P43681 627 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 OR1D5P58170 312 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 RPL26P61254 145 aaKnown RBP10.54□□□□□ -0.72
NELFE-213ENST00000494956 B4GALNT1Q00973 533 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 CDK18Q07002 472 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 TFDP3Q5H9I0 405 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 HENMT1Q5T8I9 393 aaKnown RBP10.54□□□□□ -0.72
NELFE-213ENST00000494956 NKAIN2Q5VXU1 208 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 C11orf63Q6NUN7 778 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 USP53Q70EK8 1073 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 ZNF765Q7L2R6 523 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 SPRED1Q7Z699 444 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 CCDC170Q8IYT3 715 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 KATNAL2Q8IYT4 538 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 NRSN1Q8IZ57 195 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 ZNF567Q8N184 647 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 ARL14Q8N4G2 192 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 SLC25A41Q8N5S1 370 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 SPC24Q8NBT2 197 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 EXD1Q8NHP7 514 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 TFB1MQ8WVM0 346 aaKnown RBP10.54□□□□□ -0.72
NELFE-213ENST00000494956 SCARF2Q96GP6 870 aaPredicted RBP10.54□□□□□ -0.72
NELFE-213ENST00000494956 TEKT5Q96M29 485 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 PANX2Q96RD6 677 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 SLC25A51Q9H1U9 297 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 FAM83DQ9H4H8 585 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 BPIFA1Q9NP55 256 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 KCTD5Q9NXV2 234 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 ZNHIT2Q9UHR6 403 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms