RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 GDF10P55107 478 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 P3H1Q32P28 736 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 HENMT1Q5T8I9 393 aaKnown RBP15.85■□□□□ 0.13
LIME1-209ENST00000494776 TAF8Q7Z7C8 310 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 TRIM74Q86UV6 250 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 SDR16C5Q8N3Y7 309 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 GPR26Q8NDV2 337 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 EID2BQ96D98 161 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 TBL1YQ9BQ87 522 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 APOL2Q9BQE5 337 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 GORASP1Q9BQQ3 440 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 FRMD8Q9BZ67 464 aaPredicted RBP15.85■□□□□ 0.13
LIME1-209ENST00000494776 NCKIPSDQ9NZQ3 722 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 TMEM98Q9Y2Y6 226 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 PKP3Q9Y446 797 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 PCDHGA1Q9Y5H4 931 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 ACACBO00763 2458 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 COL5A1P20908 1838 aaPredicted RBP15.84■□□□□ 0.13
LIME1-209ENST00000494776 TOP3BO95985 862 aaKnown RBP15.84■□□□□ 0.13
LIME1-209ENST00000494776 SOD1P00441 154 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 CEACAM5P06731 702 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 CDK4P11802 303 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 MYF5P13349 255 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 HMGCLP35914 325 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 RPIAP49247 311 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 ACADVLP49748 655 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 SPARCL1Q14515 664 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 KCTD16Q68DU8 428 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 LVRNQ6Q4G3 990 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 DHRS13Q6UX07 377 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 MARK2Q7KZI7 788 aaKnown RBP15.84■□□□□ 0.13
LIME1-209ENST00000494776 RAB44Q7Z6P3 723 aaPredicted RBP15.84■□□□□ 0.13
LIME1-209ENST00000494776 TAB3Q8N5C8 712 aaPredicted RBP15.84■□□□□ 0.13
LIME1-209ENST00000494776 CCDC89Q8N998 374 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 FAM181AQ8N9Y4 354 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 CNTNAP3BQ96NU0 1288 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 WDR24Q96S15 920 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 ZSCAN5AQ9BUG6 496 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 SCNM1Q9BWG6 230 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 CNTNAP3Q9BZ76 1288 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 TMEM168Q9H0V1 697 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 GULP1Q9UBP9 304 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 SUFUQ9UMX1 484 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 GPR34Q9UPC5 381 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 GPSM3Q9Y4H4 160 aa15.84■□□□□ 0.13
LIME1-209ENST00000494776 FADS2P1A8MWK0 482 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 PSMD3O43242 534 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 USP12O75317 370 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 METTL18O95568 372 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 CKMT1AP12532 417 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 BPIP17213 487 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 ACP1P24666 158 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 ADRA1AP35348 466 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 LMAN1P49257 510 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 DCDC1P59894 354 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 SHC2P98077 582 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 ILF3Q12906 894 aaKnown RBP eCLIP15.83■□□□□ 0.12
LIME1-209ENST00000494776 ILKQ13418 452 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 OLIG2Q13516 323 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 NR0B2Q15466 257 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 OASLQ15646 514 aaKnown RBP15.83■□□□□ 0.12
LIME1-209ENST00000494776 CCNG2Q16589 344 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 C6orf132Q5T0Z8 1188 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 ZDHHC20Q5W0Z9 365 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 RANBP10Q6VN20 620 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 GSTA5Q7RTV2 222 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 SLC35F6Q8N357 371 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 TRAM1L1Q8N609 369 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 FAM46DQ8NEK8 389 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 COX14Q96I36 57 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 LRRC40Q9H9A6 602 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 SIRPGQ9P1W8 387 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 SLC17A4Q9Y2C5 497 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 ZKSCAN5Q9Y2L8 839 aa15.83■□□□□ 0.12
LIME1-209ENST00000494776 CPED1A4D0V7 1026 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 C2orf81A6NN90 581 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 E7EVH7 732 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 STX7O15400 261 aaKnown RBP15.82■□□□□ 0.12
LIME1-209ENST00000494776 BUD23O43709 281 aaKnown RBP15.82■□□□□ 0.12
LIME1-209ENST00000494776 SLC25A14O95258 325 aaPredicted RBP15.82■□□□□ 0.12
LIME1-209ENST00000494776 ATP1A1P05023 1023 aaKnown RBP15.82■□□□□ 0.12
LIME1-209ENST00000494776 IVLP07476 585 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 PDPK2PQ6A1A2 396 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 GALNT13Q8IUC8 556 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 GALNT15Q8N3T1 639 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 TTC30BQ8N4P2 665 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 RTP4Q96DX8 246 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 PBKQ96KB5 322 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 PLEKHG4BQ96PX9 1271 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 BOCQ9BWV1 1114 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 GSDMCQ9BYG8 508 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 HOMER3Q9NSC5 361 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.82■□□□□ 0.12
LIME1-209ENST00000494776 ZNHIT2Q9UHR6 403 aa15.82■□□□□ 0.12
LIME1-209ENST00000494776 FEZ2Q9UHY8 353 aaPredicted RBP15.82■□□□□ 0.12
LIME1-209ENST00000494776 DKK1O94907 266 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 CRTAMO95727 393 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 FUCA1P04066 466 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 FDFT1P37268 417 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 SPAM1P38567 509 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms