RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 Q6ZVL8 140 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
ERCC3-209ENST00000494464 NLRP8Q86W28 1048 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 DEPDC7Q96QD5 511 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 LGR4Q9BXB1 951 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 DOLKQ9UPQ8 538 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 PRSS38A1L453 326 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 SOD1P00441 154 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 PYGLP06737 847 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 CD86P42081 329 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 DYNLT1P63172 113 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 PTSQ03393 145 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 PRKD1Q15139 912 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-209ENST00000494464 PTPRRQ15256 657 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 BEND6Q5SZJ8 279 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-209ENST00000494464 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 SPOCD1Q6ZMY3 1216 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.15□□□□□ -0.3
ERCC3-209ENST00000494464 KYQ8NBH2 561 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 WDR48Q8TAF3 677 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 KRT35Q92764 455 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
ERCC3-209ENST00000494464 SMIM14Q96QK8 99 aa13.15□□□□□ -0.3
ERCC3-209ENST00000494464 FRMD8Q9BZ67 464 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-209ENST00000494464 MRPL40Q9NQ50 206 aaKnown RBP13.15□□□□□ -0.3
ERCC3-209ENST00000494464 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
ERCC3-209ENST00000494464 hCG_1818297A0A087WSY0 165 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 GOLGA6L10A0A0M3HER8 536 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 CPED1A4D0V7 1026 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 CST8O60676 142 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 TCEA3O75764 348 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 FGGP02679 453 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-209ENST00000494464 MARCKSL1P49006 195 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 RWDD2BP57060 319 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 CYP4F3Q08477 520 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 QPCTQ16769 361 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 LONRF2Q1L5Z9 754 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 PERM1Q5SV97 790 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 ADAMTSL4Q6UY14 1074 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 NRSN1Q8IZ57 195 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 EIF1ADQ8N9N8 165 aaKnown RBP13.14□□□□□ -0.31
ERCC3-209ENST00000494464 OR6C4Q8NGE1 309 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 EXD1Q8NHP7 514 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 TADA1Q96BN2 335 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 GRAMD1AQ96CP6 724 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 AP2M1Q96CW1 435 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 IMP4Q96G21 291 aaKnown RBP13.14□□□□□ -0.31
ERCC3-209ENST00000494464 TRIB3Q96RU7 358 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 ADGRE3Q9BY15 652 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 CEP41Q9BYV8 373 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 ABCG4Q9H172 646 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 SLC25A51Q9H1U9 297 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 ABCG8Q9H221 673 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 CYP4F12Q9HCS2 524 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 FAM53CQ9NYF3 392 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 PADI4Q9UM07 663 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 GPR34Q9UPC5 381 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 SLC17A4Q9Y2C5 497 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 KNTC1P50748 2209 aa13.14□□□□□ -0.31
ERCC3-209ENST00000494464 SCN8AQ9UQD0 1980 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 PKD1L2Q7Z442 2459 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 A0A0U1RQS6 177 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 CEACAM5P06731 702 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 GPR1P46091 355 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 TEX44Q53QW1 395 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 RFLNAQ6ZTI6 216 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 RCOR2Q8IZ40 523 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 GPR156Q8NFN8 814 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 TFB1MQ8WVM0 346 aaKnown RBP13.13□□□□□ -0.31
ERCC3-209ENST00000494464 AGAP3Q96P47 875 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 KRT12Q99456 494 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 CCDC3Q9BQI4 270 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 MLPHQ9BV36 600 aaPredicted RBP13.13□□□□□ -0.31
ERCC3-209ENST00000494464 TMEM168Q9H0V1 697 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 CARS2Q9HA77 564 aaKnown RBP13.13□□□□□ -0.31
ERCC3-209ENST00000494464 TRNAU1APQ9NX07 287 aaKnown RBP13.13□□□□□ -0.31
ERCC3-209ENST00000494464 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
ERCC3-209ENST00000494464 CD84Q9UIB8 345 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 PCDHB1Q9Y5F3 818 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
ERCC3-209ENST00000494464 APC2O95996 2303 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 ANKRD11Q6UB99 2663 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 RP1P56715 2156 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 C1orf232A0A0U1RR37 186 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 RGSL1A5PLK6 1076 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GOLGA6CA6NDK9 693 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 MTSS1O43312 755 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms