RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 KLKB1P03952 638 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 HMBSP08397 361 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ATXN1LP0C7T5 689 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 KITP10721 976 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 MTHFD1P11586 935 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ACO1P21399 889 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 TNFSF4P23510 183 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CD6P30203 668 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ATICP31939 592 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CSNK1EP49674 416 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 TUBP50607 506 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 TPMTP51580 245 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 NDST1P52848 882 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ARFIP2P53365 341 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 BNC1Q01954 994 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 GRIK2Q13002 908 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 HNRNPDQ14103 355 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 BMT2Q1RMZ1 405 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 HLA-BQ31612 363 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ZNF699Q32M78 642 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 TUBB8Q3ZCM7 444 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 FUT11Q495W5 492 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 FLYWCH1Q4VC44 716 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 INO80DQ53TQ3 878 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ZNF667Q5HYK9 610 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 WDR45BQ5MNZ6 344 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 C10orf120Q5SQS8 335 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 DCAF12L1Q5VU92 463 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 SPOPLQ6IQ16 392 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 GPRIN1Q7Z2K8 1008 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 RABEPKQ7Z6M1 372 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CACUL1Q86Y37 369 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 TMPRSS6Q8IU80 811 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CRYBG2Q8N1P7 616 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ZCCHC9Q8N567 271 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 SH2D3CQ8N5H7 860 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 RNF152Q8N8N0 203 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ZFP28Q8NHY6 868 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 SORCS1Q8WY21 1168 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 SYAP1Q96A49 352 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 MIEF2Q96C03 454 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 DHX58Q96C10 678 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 SMARCD1Q96GM5 515 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 BBC3Q96PG8 261 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 GABRG3Q99928 467 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CPPED1Q9BRF8 314 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 MRPL46Q9H2W6 279 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 FBXO44Q9H4M3 255 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 GAREM1Q9H706 876 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 NMUR1Q9HB89 426 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 DMAP1Q9NPF5 467 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 TLR8Q9NR97 1041 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 COMMD8Q9NX08 183 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 GPRC5BQ9NZH0 403 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 FAM30AQ9NZY2 134 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 HMGXB4Q9UGU5 601 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 EIF2B4Q9UI10 523 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CLEC4EQ9ULY5 219 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 RUVBL1Q9Y265 456 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 SLCO1B1Q9Y6L6 691 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 STON1Q9Y6Q2 735 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 SETXQ7Z333 2677 aaKnown RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 A0A1B0GTW7 788 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 A0A1B0GVT2 93 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 A0A1W2PPL8 197 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 TRABD2BA6NFA1 517 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 LRRIQ3A6PVS8 624 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 ISM1B1AKI9 464 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 F8W8V4 182 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SPTLC2O15270 562 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 EIF3DO15371 548 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 BCAT2O15382 392 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SYNCRIPO60506 623 aaKnown RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 RARGP13631 454 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 HLA-EP13747 358 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 COMTP21964 271 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 FMO1Q01740 532 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 STK38Q15208 465 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 GEN1Q17RS7 908 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 KNOP1Q1ED39 458 aaKnown RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SGSM1Q2NKQ1 1148 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 HS1BP3Q53T59 392 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 DRICH1Q6PGQ1 229 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 CLEC20AQ6ZU45 233 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SCD5Q86SK9 330 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 LINC00301Q8NCQ3 95 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 NLGN4YQ8NFZ3 816 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SLC35B2Q8TB61 432 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 DNASE2BQ8WZ79 361 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SNX19Q92543 992 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 KIAA1191Q96A73 305 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SIPA1Q96FS4 1042 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 TWNKQ96RR1 684 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 C1orf43Q9BWL3 253 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 TRIM54Q9BYV2 358 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 DPH1Q9BZG8 443 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 WDR12Q9GZL7 423 aaKnown RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 TNMDQ9H2S6 317 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 PPCSQ9HAB8 311 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 CSNK1G1Q9HCP0 422 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms