RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ITGA9Q13797 1035 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 MSS51Q4VC12 460 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PEAR1Q5VY43 1037 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 LAYNQ6UX15 382 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 Q6ZSR6 202 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 ABI3BPQ7Z7G0 1075 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 IQCHQ86VS3 1027 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PELI3Q8N2H9 469 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 OR13H1Q8NG92 308 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 LRRC39Q96DD0 335 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 CDKN2AIPNLQ96HQ2 116 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 SIGLEC10Q96LC7 697 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 BMFQ96LC9 184 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 ZNF778Q96MU6 729 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 AGAP2Q99490 1192 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 FAM129AQ9BZQ8 928 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PHPT1Q9NRX4 125 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 SLC2A6Q9UGQ3 507 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 OR1A2Q9Y585 309 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 SLC30A1Q9Y6M5 507 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 FAM237BA0A1B0GVD1 139 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 CACNB4O00305 520 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 INPP4BO15327 924 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 POLBP06746 335 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PGAM1P18669 254 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PAMP19021 973 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 NMBRP28336 390 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 TEAD1P28347 426 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 MC4RP32245 332 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 YPEL5P62699 121 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PDE1CQ14123 709 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 HP1BP3Q5SSJ5 553 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PDPK2PQ6A1A2 396 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 ZDHHC24Q6UX98 284 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 ADAMTSL4Q6UY14 1074 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 KDM7AQ6ZMT4 941 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 CCDC25Q86WR0 208 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 HEATR4Q86WZ0 1026 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 OR13J1Q8NGT2 312 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 OR6P1Q8NGX9 317 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 ZNF669Q96BR6 464 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 TBATAQ96M53 351 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 EBNA1BP2Q99848 306 aaKnown RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 NAT9Q9BTE0 207 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 APOOQ9BUR5 198 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 FOXP3Q9BZS1 431 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 GDF3Q9NR23 364 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 CHMP2BQ9UQN3 213 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 RPS6KL1Q9Y6S9 549 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 A0A1W2PR77 199 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 FADS2P1A8MWK0 482 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 BHMG1C9JSJ3 638 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-223ENST00000494123 H7C0S8 307 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 TLR4O00206 839 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 VILLO15195 856 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 EIF3HO15372 352 aaKnown RBP eCLIP14.47□□□□□ -0.09
BRCA1-223ENST00000494123 SRP72O76094 671 aaKnown RBP14.47□□□□□ -0.09
BRCA1-223ENST00000494123 WNT1P04628 370 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 ITGALP20701 1170 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 HTR1BP28222 390 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 TRIM23P36406 574 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 ELK3P41970 407 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 PFN3P60673 137 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 NHLH1Q02575 133 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 PTK2BQ14289 1009 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 CHRNA6Q15825 494 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 CCDC6Q16204 474 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 TRIM61Q5EBN2 209 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 ZRANB3Q5FWF4 1079 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 AFTPHQ6ULP2 937 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 CES3Q6UWW8 571 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 DCP2Q8IU60 420 aaKnown RBP14.47□□□□□ -0.09
BRCA1-223ENST00000494123 CCNJLQ8IV13 435 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 ZBED8Q8IZ13 594 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 AGGF1Q8N302 714 aaeCLIP14.47□□□□□ -0.09
BRCA1-223ENST00000494123 GDAP1Q8TB36 358 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 ZNF398Q8TD17 642 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 DTX3LQ8TDB6 740 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 UBXN4Q92575 508 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 HDAC10Q969S8 669 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 MFSD3Q96ES6 412 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 HIC2Q96JB3 615 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 ASB8Q9H765 288 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 SUDS3Q9H7L9 328 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-223ENST00000494123 SAYSD1Q9NPB0 183 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 RRAGDQ9NQL2 400 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-223ENST00000494123 TREX1Q9NSU2 369 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 ZDHHC18Q9NUE0 388 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 RAPGEFL1Q9UHV5 662 aa14.47□□□□□ -0.09
BRCA1-223ENST00000494123 A0A1B0GVT2 93 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 E7ESA3 106 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 USP1O94782 785 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 SOD1P00441 154 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 MYCLP1P12525 358 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-223ENST00000494123 KELP23276 732 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 CARSP49589 748 aaKnown RBP14.46□□□□□ -0.09
BRCA1-223ENST00000494123 ARSDP51689 593 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 XIAPP98170 497 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 CDK3Q00526 305 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 ACVR1Q04771 509 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms