RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 XPNPEP2O43895 674 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 IPO7O95373 1038 aaKnown RBP5.33□□□□□ -1.56
SSB-212ENST00000494051 MLYCDO95822 493 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 IGLV2-11P01706 119 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 CLEC3BP05452 202 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 CDH1P12830 882 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 HLA-DOBP13765 273 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 MYOD1P15172 320 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 ITGA2P17301 1181 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 MPP1Q00013 466 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 ARL16Q0P5N6 197 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 CSTF3Q12996 717 aaKnown RBP5.33□□□□□ -1.56
SSB-212ENST00000494051 GRIK2Q13002 908 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 SYT16Q17RD7 645 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 CCDC96Q2M329 555 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 CDONQ4KMG0 1287 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 FRG2Q64ET8 278 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 CYP20A1Q6UW02 462 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 SLC9B2Q86UD5 537 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.33□□□□□ -1.56
SSB-212ENST00000494051 C1orf87Q8N0U7 546 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 UCMAQ8WVF2 138 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 APBB2Q92870 758 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 RHBDF1Q96CC6 855 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 POLR3GLQ9BT43 218 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 POLR1BQ9H9Y6 1135 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 RANGRFQ9HD47 186 aaPredicted RBP5.33□□□□□ -1.56
SSB-212ENST00000494051 TXLNGQ9NUQ3 528 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 TMEM30AQ9NV96 361 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 RALYQ9UKM9 306 aaKnown RBP5.33□□□□□ -1.56
SSB-212ENST00000494051 ZNF711Q9Y462 761 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 NOTCH4Q99466 2003 aa5.33□□□□□ -1.56
SSB-212ENST00000494051 BMPR1BO00238 502 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 USP8P40818 1118 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 TAS2R38P59533 333 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 ISL1P61371 349 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 DCST1Q5T197 706 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 TRNP1Q6NT89 227 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 GDPD4Q6W3E5 623 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 FOXL2NBQ6ZUU3 175 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 KMT5CQ86Y97 462 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 SRBD1Q8N5C6 995 aaKnown RBP5.32□□□□□ -1.56
SSB-212ENST00000494051 FRMD1Q8N878 549 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 KBTBD3Q8NAB2 608 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 TDRD7Q8NHU6 1098 aaKnown RBP5.32□□□□□ -1.56
SSB-212ENST00000494051 C7orf26Q96N11 449 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 WDFY2Q96P53 400 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 NODALQ96S42 347 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 VPS33BQ9H267 617 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 PLEKHA5Q9HAU0 1116 aa5.32□□□□□ -1.56
SSB-212ENST00000494051 SCN5AQ14524 2016 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 A0A1W2PQF6 199 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 B4E171 279 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 EPB41L2O43491 1005 aaKnown RBP5.31□□□□□ -1.56
SSB-212ENST00000494051 LMX1BO60663 402 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 JRKO75564 520 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 SLC25A12O75746 678 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 TMEM63AO94886 807 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 MBD4O95243 580 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 CCNDBP1O95273 360 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 IGKV3-20P01619 116 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 CD4P01730 458 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 CETPP11597 493 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 HOXC9P31274 260 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 TSPAN7P41732 249 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 CLCN3P51790 818 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 MED22Q15528 200 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 BRAT1Q6PJG6 821 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 DSTYKQ6XUX3 929 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 GPR180Q86V85 440 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 MUC20Q8N307 709 aaPredicted RBP5.31□□□□□ -1.56
SSB-212ENST00000494051 ACVR1CQ8NER5 493 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 OR13A1Q8NGR1 328 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 ARHGEF26Q96DR7 871 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 QRFPRQ96P65 431 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 LTB4R2Q9NPC1 389 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 ORC3Q9UBD5 711 aaPredicted RBP5.31□□□□□ -1.56
SSB-212ENST00000494051 AASSQ9UDR5 926 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 ACSL5Q9ULC5 683 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 KLHL20Q9Y2M5 609 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 PIAS3Q9Y6X2 628 aa5.31□□□□□ -1.56
SSB-212ENST00000494051 A0A087WYN8 130 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 LILRA5A6NI73 299 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 C16orf97H3BN30 126 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 M0QZ24 198 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 HS3ST1O14792 307 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 CRYAAP02489 173 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 ATP1A1P05023 1023 aaKnown RBP5.3□□□□□ -1.56
SSB-212ENST00000494051 UBA1P22314 1058 aaKnown RBP5.3□□□□□ -1.56
SSB-212ENST00000494051 NFKBIAP25963 317 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 FASLGP48023 281 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 HYAL1Q12794 435 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 MAD2L1Q13257 205 aaPredicted RBP5.3□□□□□ -1.56
SSB-212ENST00000494051 STPG1Q5TH74 334 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 TTI2Q6NXR4 508 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 TMTC3Q6ZXV5 915 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 DSG4Q86SJ6 1040 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 CERS3Q8IU89 383 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 LMNTD1Q8N9Z9 388 aa5.3□□□□□ -1.56
SSB-212ENST00000494051 PIGTQ969N2 578 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms