RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 PRSS56P0CW18 603 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 ITGALP20701 1170 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 OGNP20774 298 aaKnown RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 SERPINB9P50453 376 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 CSE1LP55060 971 aaKnown RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 MPP1Q00013 466 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 CREB5Q02930 508 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 CTBP1Q13363 440 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 NFATC2Q13469 925 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 SEMA3AQ14563 771 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 CHRNA6Q15825 494 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 ZRANB3Q5FWF4 1079 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 AARS2Q5JTZ9 985 aaKnown RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 HENMT1Q5T8I9 393 aaKnown RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 KIAA1161Q6NSJ0 714 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 PSAPL1Q6NUJ1 521 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 TAOK1Q7L7X3 1001 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 SNX20Q7Z614 316 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 STRA8Q7Z7C7 330 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 GALNT7Q86SF2 657 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 SDCCAG8Q86SQ7 713 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 FAM124AQ86V42 546 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 PIANPQ8IYJ0 282 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 PGBD3Q8N328 593 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 SCG3Q8WXD2 468 aaKnown RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 NUS1Q96E22 293 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 MCMBPQ9BTE3 642 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 FAM83DQ9H4H8 585 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 TMBIM4Q9HC24 238 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 ITM2CQ9NQX7 267 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 DLGAP2Q9P1A6 1054 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 CTNNAL1Q9UBT7 734 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 EBF1Q9UH73 591 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 COQ6Q9Y2Z9 468 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 PLXNA2O75051 1894 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 TRBV5-4A0A0C4DH59 114 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 IGLON5A6NGN9 336 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 RGS16O15492 202 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 GPR39O43194 453 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 RNGTTO60942 597 aaKnown RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 CNTFP26441 200 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 LEPRP48357 1165 aaKnown RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 CD151P48509 253 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 CDKN1CP49918 316 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 LIMK2P53671 638 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 RPS21P63220 83 aaKnown RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ITGA9Q13797 1035 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 TMED2Q15363 201 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ZNF284Q2VY69 593 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 GPR33Q49SQ1 333 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 RNF187Q5TA31 235 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 GRTP1Q5TC63 336 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 SEL1L3Q68CR1 1132 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 NEK5Q6P3R8 708 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 TAS2R42Q7RTR8 314 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 LDB1Q86U70 411 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 TRAM1L1Q8N609 369 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 GOLGA6L1Q8N7Z2 621 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ZNF398Q8TD17 642 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 SCAMP4Q969E2 229 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ULK4Q96C45 1275 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 AP2M1Q96CW1 435 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 PGM2Q96G03 612 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 TCF12Q99081 682 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 RBBP8Q99708 897 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ZSCAN5AQ9BUG6 496 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 RIOK2Q9BVS4 552 aaKnown RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 SPATA16Q9BXB7 569 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 BTBD1Q9H0C5 482 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ABCG8Q9H221 673 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 CENPHQ9H3R5 247 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 RHOJQ9H4E5 214 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 FAM96AQ9H5X1 160 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ASB8Q9H765 288 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 SGK2Q9HBY8 427 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 FBXO6Q9NRD1 293 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 INTS10Q9NVR2 710 aaKnown RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 SMOXQ9NWM0 555 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 KCTD5Q9NXV2 234 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 TBK1Q9UHD2 729 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 ZFR2Q9UPR6 939 aaKnown RBP11.34□□□□□ -0.59
MCF2L-231ENST00000494043 VCANP13611 3396 aa11.34□□□□□ -0.59
MCF2L-231ENST00000494043 IQANK1A0A1B0GTG1 560 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 A0A1W2PQU0 124 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 PRR23AA6NEV1 266 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 TMEM221A6NGB7 291 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 LRRC72A6NJI9 287 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 AGAP14A8MT82 685 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 M0R296 226 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 PI15O43692 258 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ZNF217O75362 1048 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 KRT37O76014 449 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 KRT38O76015 456 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 TM7SF2O76062 418 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 S1PR4O95977 384 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms