RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 E9PBE3 544 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 SLCO1B7G3V0H7 640 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 UBXN8O00124 270 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 SDHDO14521 159 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 NEMP1O14524 444 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 KLHL41O60662 606 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 KERAO60938 352 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 PEX11AO75192 247 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TSPAN12O95859 305 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 CD9P21926 228 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 SERPINA4P29622 427 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 FMO4P31512 558 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 CA5AP35218 305 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 CACNG1Q06432 222 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 SLC20A2Q08357 652 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 NAA25Q14CX7 972 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 PTPRNQ16849 979 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 SH2D4BQ5SQS7 431 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 ZNF678Q5SXM1 525 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 ELMSAN1Q6PJG2 1045 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 CUZD1Q86UP6 607 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 PCDH20Q8N6Y1 951 aaKnown RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 PTGR2Q8N8N7 351 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 RBM15BQ8NDT2 890 aaKnown RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 RHEBL1Q8TAI7 183 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 ING5Q8WYH8 240 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 ISG20Q96AZ6 181 aaKnown RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 FAM136AQ96C01 138 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 MAELQ96JY0 434 aaKnown RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TUBGCP5Q96RT8 1024 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 LYSMD1Q96S90 227 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 GPR21Q99679 349 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 CCDC28BQ9BUN5 200 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 BBS2Q9BXC9 721 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 NUF2Q9BZD4 464 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 DERL2Q9GZP9 239 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 CCDC68Q9H2F9 335 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TFB2MQ9H5Q4 396 aaKnown RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TDP1Q9NUW8 608 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 ZDHHC7Q9NXF8 308 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TAS2R13Q9NYV9 303 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TAS2R1Q9NYW7 299 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 GTSE1Q9NYZ3 720 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 VTI1BQ9UEU0 232 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 SLC25A13Q9UJS0 675 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 CDYLQ9Y232 598 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 FAM50BQ9Y247 325 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 FNDC3AQ9Y2H6 1198 aaKnown RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 PKP3Q9Y446 797 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 WNT6Q9Y6F9 365 aa10.6□□□□□ -0.71
CLCN6-208ENST00000494028 TNRC18O15417 2968 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 PIKFYVEQ9Y2I7 2098 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 TRBV5-4A0A0C4DH59 114 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 GOLGA8QA0A0J9YX86 632 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 C1orf232A0A0U1RR37 186 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 GOLGA8OA6NCC3 632 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 NPIPB15A6NHN6 443 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 GOLGA8NF8WBI6 632 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 OR1I1O60431 355 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SMIM24O75264 130 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 VPS26AO75436 327 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SKAP2O75563 359 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 PRAMEF1O95521 474 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 RB1P06400 928 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 RPS17P08708 135 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 MTHFD2P13995 350 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 HNRNPLP14866 589 aaKnown RBP eCLIP10.59□□□□□ -0.714e-10■■■□□ 15.1
CLCN6-208ENST00000494028 RPS3P23396 243 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 PRDX6P30041 224 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 HMGCLP35914 325 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 KCNC1P48547 511 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 RGS19P49795 217 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 CCNHP51946 323 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 INHBCP55103 352 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 ADARP55265 1226 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 ATP6V0D1P61421 351 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SNRPD1P62314 119 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SATB1Q01826 763 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 DNAL1Q4LDG9 190 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 UNC50Q53HI1 259 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 TCEAL5Q5H9L2 206 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 LY6G5CQ5SRR4 150 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 FAM219BQ5XKK7 198 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 FAM109BQ6ICB4 259 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 PAQR3Q6TCH7 311 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 FAM151BQ6UXP7 276 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 RPS27LQ71UM5 84 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 GRASPQ7Z6J2 395 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 KIAA0907Q7Z7F0 614 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 ADGRD2Q7Z7M1 963 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 TSPAN33Q86UF1 283 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SUGP1Q8IWZ8 645 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 STK40Q8N2I9 435 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 PHTF2Q8N3S3 785 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 POU5F2Q8N7G0 328 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 ZNF557Q8N988 423 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SIDT2Q8NBJ9 832 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 LKAAEAR1Q8TD35 194 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 AGAP11Q8TF27 550 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms