RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 BAHD1Q8TBE0 780 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-209ENST00000493166 ACTRT1Q8TDG2 376 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 LMX1AQ8TE12 382 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 OR1E3Q8WZA6 343 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 MAGOHBQ96A72 148 aaKnown RBP12.72□□□□□ -0.37
CLIP2-209ENST00000493166 PDXPQ96GD0 296 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 HIC2Q96JB3 615 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 TBATAQ96M53 351 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 ZSCAN5AQ9BUG6 496 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 SPATA16Q9BXB7 569 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 TCEAL2Q9H3H9 227 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-209ENST00000493166 ETNK1Q9HBU6 452 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 FGF22Q9HCT0 170 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 BPIFA1Q9NP55 256 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 RAB6BQ9NRW1 208 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 KCND1Q9NSA2 647 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 SMARCAL1Q9NZC9 954 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 NFKBIL1Q9UBC1 381 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-209ENST00000493166 FTSJ1Q9UET6 329 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 MOSPD1Q9UJG1 213 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 PKP3Q9Y446 797 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 PTPRBP23467 1997 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 GOLGA4Q13439 2230 aaKnown RBP12.72□□□□□ -0.37
CLIP2-209ENST00000493166 NCOR2Q9Y618 2525 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 PRSS38A1L453 326 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 C2orf81A6NN90 581 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 ERI2A8K979 691 aaKnown RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 FADS2P1A8MWK0 482 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 SCAMP1O15126 338 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 BPIP17213 487 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 RPL22P35268 128 aaKnown RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 SIM1P81133 766 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 TCEA2Q15560 299 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 TAF1AQ15573 450 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 ZDHHC20Q5W0Z9 365 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 DOK6Q6PKX4 331 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 C4orf22Q6V702 233 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 ERMP1Q7Z2K6 904 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 LINC00523Q86TU6 105 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 TRIM74Q86UV6 250 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 CNDP2Q96KP4 475 aaKnown RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 PLEKHG4BQ96PX9 1271 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 LRRC61Q9BV99 259 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 FRMD8Q9BZ67 464 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 SUDS3Q9H7L9 328 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 ARNT2Q9HBZ2 717 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 CYP4F12Q9HCS2 524 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 MRPL40Q9NQ50 206 aaKnown RBP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 NLGN3Q9NZ94 848 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLIP2-209ENST00000493166 ARL5AQ9Y689 179 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 CSNK1G3Q9Y6M4 447 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 DGKBQ9Y6T7 804 aa12.71□□□□□ -0.37
CLIP2-209ENST00000493166 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
CLIP2-209ENST00000493166 TNFSF14O43557 240 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 BUD23O43709 281 aaKnown RBP12.7□□□□□ -0.38
CLIP2-209ENST00000493166 PHF2O75151 1096 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 PPFIA2O75334 1257 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 CRTAMO95727 393 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 LDOC1O95751 146 aaPredicted RBP12.7□□□□□ -0.38
CLIP2-209ENST00000493166 CEACAM5P06731 702 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 APRTP07741 180 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 LPOP22079 712 aaPredicted RBP12.7□□□□□ -0.38
CLIP2-209ENST00000493166 SPAM1P38567 509 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 PDE1BQ01064 536 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 C1orf61Q13536 156 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 SEMA5AQ13591 1074 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 ELOCQ15369 112 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 CYP1B1Q16678 543 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 PAPD7Q5XG87 772 aaKnown RBP12.7□□□□□ -0.38
CLIP2-209ENST00000493166 KCTD16Q68DU8 428 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 PDPK2PQ6A1A2 396 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 DENND5AQ6IQ26 1287 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 PPP1R21Q6ZMI0 780 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 GLRX5Q86SX6 157 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 FSTL5Q8N475 847 aaPredicted RBP12.7□□□□□ -0.38
CLIP2-209ENST00000493166 TRAM1L1Q8N609 369 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 OR4C6Q8NH72 309 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 BRSK1Q8TDC3 778 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 COX14Q96I36 57 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 DUSP23Q9BVJ7 150 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 CARS2Q9HA77 564 aaKnown RBP12.7□□□□□ -0.38
CLIP2-209ENST00000493166 IL17CQ9P0M4 197 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 DOLKQ9UPQ8 538 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 SAR1BQ9Y6B6 198 aa12.7□□□□□ -0.38
CLIP2-209ENST00000493166 LMO7DNF2Z398 122 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 TRIM38O00635 465 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 SIGLEC6O43699 453 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 ASMTLO95671 621 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 GAS8O95995 478 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 IVLP07476 585 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 ANXA6P08133 673 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 CELA2BP08218 269 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-209ENST00000493166 COILP38432 576 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-209ENST00000493166 GNPDA1P46926 289 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 POLD2P49005 469 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 BASP1P80723 227 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms