RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RFPL1O75677 317 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 HAUS5O94927 633 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 S1PR4O95977 384 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 ADH1BP00325 375 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 CD72P21854 359 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 SPAM1P38567 509 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 ABCG1P45844 678 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 STC1P52823 247 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 ILF2Q12905 390 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 CCINQ13939 588 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 CST6Q15828 149 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 TYSND1Q2T9J0 566 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 AARS2Q5JTZ9 985 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 ZDHHC20Q5W0Z9 365 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 ZNF776Q68DI1 518 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 LDB1Q86U70 411 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 C4orf33Q8N1A6 199 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 ANKS4BQ8N8V4 417 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 OR2T3Q8NH03 318 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 ALKBH8Q96BT7 664 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 SERAC1Q96JX3 654 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 TCF12Q99081 682 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 GPR22Q99680 433 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 HDAC8Q9BY41 377 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 IL26Q9NPH9 171 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 PKD2L2Q9NZM6 624 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 NCOR1O75376 2440 aa14.03□□□□□ -0.16
PDZRN3-210ENST00000492909 LRRK1Q38SD2 2015 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 GLYATL1P3A0A0U1RQE8 302 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 GOLGA8RI6L899 631 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 PFDN6O15212 129 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 RASSF9O75901 435 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 SRP72O76094 671 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 PRAMEF1O95521 474 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 ALDOAP04075 364 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 C1SP09871 688 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 ELFN1P0C7U0 828 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 PYGBP11216 843 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 C5AR1P21730 350 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 P2RY2P41231 377 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 SCTRP47872 440 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 SPINT3P49223 89 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 TTPAP49638 278 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 ZXDAP98168 799 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 CACNG1Q06432 222 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 RALGDSQ12967 914 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 SEMA3AQ14563 771 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 SPRED3Q2MJR0 410 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 HSF5Q4G112 596 aaPredicted RBP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 KIAA1211LQ6NV74 962 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 CNSTQ6PJW8 725 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 FAM151BQ6UXP7 276 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 ZNF852Q6ZMS4 543 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 GPR26Q8NDV2 337 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 RAB7BQ96AH8 199 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 PLEKHG4BQ96PX9 1271 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 KLF6Q99612 283 aaPredicted RBP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 SSU72Q9NP77 194 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 KCNK9Q9NPC2 374 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 NDRG2Q9UN36 371 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 VPS9D1Q9Y2B5 631 aa14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 MTO1Q9Y2Z2 717 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-210ENST00000492909 TMEM120BA0PK00 339 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 H0Y858 1186 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PLK4O00444 970 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 GAPDHSO14556 408 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 TPP1O14773 563 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 AREL1O15033 823 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 MID1O15344 667 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 DCXO43602 365 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 DNAJC8O75937 253 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 VIMP08670 466 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PRSS56P0CW18 603 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 ITGALP20701 1170 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 TYK2P29597 1187 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 POLD2P49005 469 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CDKN1CP49918 316 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SERPINB8P50452 374 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 COPAP53621 1224 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PRKCQQ04759 706 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SLC18A2Q05940 514 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CNTN1Q12860 1018 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 ZNF789Q5FWF6 425 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PSAPL1Q6NUJ1 521 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 TAS2R42Q7RTR8 314 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SNX20Q7Z614 316 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CACUL1Q86Y37 369 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PIANPQ8IYJ0 282 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 PNPLA1Q8N8W4 532 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 RPLP0P6Q8NHW5 317 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 ACMSDQ8TDX5 336 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 ARHGEF3Q9NR81 526 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 RAD18Q9NS91 495 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 INTS10Q9NVR2 710 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SLC39A10Q9ULF5 831 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 CA14Q9ULX7 337 aa14.01□□□□□ -0.17
PDZRN3-210ENST00000492909 SMG5Q9UPR3 1016 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms