RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PIM3Q86V86 326 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 SFRP1Q8N474 314 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 Q8N9G6 341 aaPredicted RBP8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 OR4D9Q8NGE8 314 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 EXD1Q8NHP7 514 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 SLC35G2Q8TBE7 412 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 ZDHHC1Q8WTX9 485 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 OLFM3Q96PB7 478 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 CCNL2Q96S94 520 aaPredicted RBP8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 CMKLR1Q99788 373 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 SEMA6CQ9H3T2 930 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 PCDH9Q9HC56 1237 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 EPB41L5Q9HCM4 733 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 CTTNBP2NLQ9P2B4 639 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 NFKBIL1Q9UBC1 381 aaPredicted RBP8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 CHKBQ9Y259 395 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 LOXL2Q9Y4K0 774 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 ADGRG1Q9Y653 693 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 IGHV1OR21-1A0A087WYE8 117 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 IGHV5-10-1A0A0J9YXX1 117 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 B4DGG1 531 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 C9orf172C9J069 976 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 GOLGA6L19H0YKK7 550 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CLDN7O95471 211 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 HGFP14210 728 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CD82P27701 267 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 ETV5P41161 510 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 GPR1P46091 355 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 GNPDA1P46926 289 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 SPINT3P49223 89 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 ARSDP51689 593 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CLCNKAP51800 687 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 LIMK2P53671 638 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 OR1D5P58170 312 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 TRA2AQ13595 282 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 TRIM14Q14142 442 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 C16orf72Q14CZ0 275 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 DENND2CQ68D51 928 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 RAET1GQ6H3X3 334 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 VSTM4Q8IW00 320 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CCDC13Q8IYE1 715 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 PATE1Q8WXA2 126 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CTNNBL1Q8WYA6 563 aaPredicted RBP8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 IMP4Q96G21 291 aaKnown RBP8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 OR2M4Q96R27 311 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CHP1Q99653 195 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 DPYSL5Q9BPU6 564 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 NUDT22Q9BRQ3 303 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 RIOK2Q9BVS4 552 aaKnown RBP8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 SPRY4Q9C004 299 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 BRD8Q9H0E9 1235 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CDH19Q9H159 772 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 RMI1Q9H9A7 625 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 HAUS2Q9NVX0 235 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 CD84Q9UIB8 345 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 INTUQ9ULD6 942 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 TMEM98Q9Y2Y6 226 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 PLEKHM1Q9Y4G2 1056 aa8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 PCYT1BQ9Y5K3 369 aaPredicted RBP8.32□□□□□ -1.08
SMARCB1-207ENST00000491967 PRAMEF33A0A0G2JMD5 474 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 EIF4E1BA6NMX2 242 aaKnown RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 RHPN2P1A8MT19 583 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 FADS2P1A8MWK0 482 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 GPR89AB7ZAQ6 455 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 KCNK1O00180 336 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 CHUKO15111 745 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ZW10O43264 779 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 PRAMEF10O60809 474 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 EML2O95834 649 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 JCHAINP01591 159 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ITGB2P05107 769 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 GPR89BP0CG08 455 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 THRAP10827 490 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 LIPCP11150 499 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 FGF3P11487 239 aaPredicted RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ITIH1P19827 911 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 PTMSP20962 102 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 CA4P22748 312 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 CSF2RBP32927 897 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 SLC1A1P43005 524 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 HADHBP55084 474 aaKnown RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 DCDC1P59894 354 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 GPLD1P80108 840 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ITKQ08881 620 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ZBTB17Q13105 803 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 TBX2Q13207 712 aaPredicted RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 TGIF1Q15583 401 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 IYDQ6PHW0 289 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 SLC30A9Q6PML9 568 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 WDR74Q6RFH5 385 aaPredicted RBP8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 CCDC81Q6ZN84 652 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 USP53Q70EK8 1073 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 ARHGAP22Q7Z5H3 698 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 TMC3Q7Z5M5 1100 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 RHOT2Q8IXI1 618 aa8.31□□□□□ -1.08
SMARCB1-207ENST00000491967 PAF1Q8N7H5 531 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms