RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 DNPEPQ9ULA0 475 aa17.19■□□□□ 0.34
PBX3-209ENST00000491787 CNOT6Q9ULM6 557 aaKnown RBP17.19■□□□□ 0.34
PBX3-209ENST00000491787 TMEM98Q9Y2Y6 226 aa17.19■□□□□ 0.34
PBX3-209ENST00000491787 LUC7L2Q9Y383 392 aaKnown RBP17.19■□□□□ 0.34
PBX3-209ENST00000491787 MFSD11O43934 449 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 TPM3P06753 285 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 ITGB6P18564 788 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 WT1P19544 449 aaPredicted RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 RPL26P61254 145 aaKnown RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 LRP8Q14114 963 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 KRT81Q14533 505 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 HADHQ16836 314 aaKnown RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 ATP13A4Q4VNC1 1196 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 CCDC122Q5T0U0 273 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 TMEM164Q5U3C3 297 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 TIGD7Q6NT04 549 aaPredicted RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 ALKBH5Q6P6C2 394 aaKnown RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 CCDC74BQ96LY2 380 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 AGAP2Q99490 1192 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 TDRD1Q9BXT4 1180 aaKnown RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 CDH19Q9H159 772 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 SUDS3Q9H7L9 328 aaPredicted RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 CD84Q9UIB8 345 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 RPL26L1Q9UNX3 145 aaKnown RBP17.18■□□□□ 0.34
PBX3-209ENST00000491787 PCDHB11Q9Y5F2 797 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 PCDHGA4Q9Y5G9 962 aa17.18■□□□□ 0.34
PBX3-209ENST00000491787 GOLGA6CA6NDK9 693 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 GOLGA6BA6NDN3 693 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 GOLGA6DP0CG33 693 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 THRAP10827 490 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 CSF2RBP32927 897 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 ACTR1BP42025 376 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 ACTR1AP61163 376 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 GPLD1P80108 840 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 DSC2Q02487 901 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 NIPAL4Q0D2K0 466 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 PDK2Q15119 407 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 IFI16Q16666 785 aaKnown RBP17.17■□□□□ 0.34
PBX3-209ENST00000491787 ANKRD20A8PQ5CZ79 823 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 RCBTB1Q8NDN9 531 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 EXD1Q8NHP7 514 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 WDR24Q96S15 920 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 ZNF670Q9BS34 389 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 RBM22Q9NW64 420 aaKnown RBP eCLIP17.17■□□□□ 0.34
PBX3-209ENST00000491787 GOLGA6AQ9NYA3 693 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 CHKBQ9Y259 395 aa17.17■□□□□ 0.34
PBX3-209ENST00000491787 B4E171 279 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 STMND1H3BQB6 276 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 AGRPO00253 132 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 DNAJC6O75061 913 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 GYPCP04921 128 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 TSPAN7P41732 249 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 ITKQ08881 620 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.16■□□□□ 0.34
PBX3-209ENST00000491787 NKAIN2Q5VXU1 208 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 TMEM71Q6P5X7 295 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 DOK6Q6PKX4 331 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 VASH2Q86V25 355 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 SFRP1Q8N474 314 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 PQLC3Q8N755 202 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 AGBL5Q8NDL9 886 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 EXTL1Q92935 676 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 NKD1Q969G9 470 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 RIOK2Q9BVS4 552 aaKnown RBP17.16■□□□□ 0.34
PBX3-209ENST00000491787 DDA1Q9BW61 102 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 IFNKQ9P0W0 207 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 VPS18Q9P253 973 aa17.16■□□□□ 0.34
PBX3-209ENST00000491787 PCYT1BQ9Y5K3 369 aaPredicted RBP17.16■□□□□ 0.34
PBX3-209ENST00000491787 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.16■□□□□ 0.34
PBX3-209ENST00000491787 RGSL1A5PLK6 1076 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 PROSCO94903 275 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 CLDN7O95471 211 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 EML2O95834 649 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 HNRNPH3P31942 346 aaKnown RBP17.15■□□□□ 0.34
PBX3-209ENST00000491787 SPINT3P49223 89 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 SLC10A2Q12908 348 aaPredicted RBP17.15■□□□□ 0.34
PBX3-209ENST00000491787 TBR1Q16650 682 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 SKOR2Q2VWA4 1001 aaPredicted RBP17.15■□□□□ 0.34
PBX3-209ENST00000491787 HENMT1Q5T8I9 393 aaKnown RBP17.15■□□□□ 0.34
PBX3-209ENST00000491787 TRIM74Q86UV6 250 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 CPNE8Q86YQ8 564 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 GALNT13Q8IUC8 556 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 BMPERQ8N8U9 685 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 ZSCAN1Q8NBB4 408 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 ZNF564Q8TBZ8 553 aaPredicted RBP17.15■□□□□ 0.34
PBX3-209ENST00000491787 SLC37A2Q8TED4 501 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 CPLX3Q8WVH0 158 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 HTR3CQ8WXA8 447 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 HDAC11Q96DB2 347 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 SLC12A9Q9BXP2 914 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 SPRY4Q9C004 299 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 PCDH9Q9HC56 1237 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 HAUS2Q9NVX0 235 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 KCNK4Q9NYG8 393 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 UVRAGQ9P2Y5 699 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 LCMT1Q9UIC8 334 aa17.15■□□□□ 0.34
PBX3-209ENST00000491787 A6NCN8 305 aa17.14■□□□□ 0.33
PBX3-209ENST00000491787 HLA-DQB2P05538 268 aa17.14■□□□□ 0.33
PBX3-209ENST00000491787 MMP2P08253 660 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms