RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FOXR1Q6PIV2 292 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 BRAT1Q6PJG6 821 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 GPR155Q7Z3F1 870 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 PGBD5Q8N414 524 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 TEX26Q8N6G2 289 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 ARL10Q8N8L6 244 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 HTR3CQ8WXA8 447 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 MAML1Q92585 1016 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 PPP1R2P1Q96PQ5 205 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 NUDCD1Q96RS6 583 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 POLR1EQ9GZS1 481 aaKnown RBP11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 ATP13A3Q9H7F0 1226 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 NT5MQ9NPB1 228 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 SEPT10Q9P0V9 454 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 SAE1Q9UBE0 346 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 KLQ9UEF7 1012 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 PADI4Q9UM07 663 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 SNX12Q9UMY4 172 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 ZNF148Q9UQR1 794 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 ZFC3H1O60293 1989 aaKnown RBP11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 A0A1W2PQM1 296 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 GOLGA6CA6NDK9 693 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 GOLGA6BA6NDN3 693 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 TRAFD1O14545 582 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 KLK10O43240 276 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 RECQL5O94762 991 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 RASGRP1O95267 797 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 PEX11BO96011 259 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 ATP1A1P05023 1023 aaKnown RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 GOLGA6DP0CG33 693 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 CXCR5P32302 372 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 ERVPABLB-1P60509 514 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 AP1S1P61966 158 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 TUBB4BP68371 445 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 IFI35P80217 286 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 MTM1Q13496 603 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 NOMO1Q15155 1222 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 ARHGAP40Q5TG30 622 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 PAPD7Q5XG87 772 aaKnown RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 ITPRIPL1Q6GPH6 555 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 AADACL2Q6P093 401 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 IGF2-ASQ6U949 168 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 C4orf22Q6V702 233 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 LIPIQ6XZB0 460 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 SDR16C5Q8N3Y7 309 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 FSTL5Q8N475 847 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 CCL4L1Q8NHW4 92 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 KIF18AQ8NI77 898 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 PTCD2Q8WV60 388 aaKnown RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 KCNE4Q8WWG9 221 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 NAT6Q93015 286 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 WDR92Q96MX6 357 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 OSBPL9Q96SU4 736 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 LGR4Q9BXB1 951 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 FOXP3Q9BZS1 431 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 GOLGA6AQ9NYA3 693 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 KLHL8Q9P2G9 620 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 TTC7AQ9ULT0 858 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 GPR34Q9UPC5 381 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 DOLKQ9UPQ8 538 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 DRG1Q9Y295 367 aaKnown RBP11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 TTLL3Q9Y4R7 772 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 HECTD1Q9ULT8 2610 aa11.01□□□□□ -0.65
TMEM39A-211ENST00000491685 A0A0U1RQS6 177 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 CDRT15L2A8MXV6 281 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 KCNK1O00180 336 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 AGRPO00253 132 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 KCNN4O15554 427 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 PSMD3O43242 534 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 TCEA3O75764 348 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 ALPIP09923 528 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 ELFN1P0C7U0 828 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 CTSEP14091 401 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 HGFP14210 728 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 PECAM1P16284 738 aaPredicted RBP11□□□□□ -0.65
TMEM39A-211ENST00000491685 CR2P20023 1033 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 UCNP55089 124 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 KIAA1024LP59773 190 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 CCL7P80098 99 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 ADCY2Q08462 1091 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 SPIDRQ14159 915 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 ELOCQ15369 112 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 BROXQ5VW32 411 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 ESRP1Q6NXG1 681 aaKnown RBP11□□□□□ -0.65
TMEM39A-211ENST00000491685 DPPA4Q7L190 304 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 GSTA5Q7RTV2 222 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 RASGEF1CQ8N431 466 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 ACTRT1Q8TDG2 376 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 TEKT5Q96M29 485 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 SLC46A1Q96NT5 459 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 AGAP3Q96P47 875 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 OLFM3Q96PB7 478 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 SMIM14Q96QK8 99 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 RBM15Q96T37 977 aaKnown RBP eCLIP11□□□□□ -0.652e-7■■■■□ 21.6
TMEM39A-211ENST00000491685 SEMA3CQ99985 751 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 SEMA4CQ9C0C4 833 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 TMEM168Q9H0V1 697 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 THSD1Q9NS62 852 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 KCTD5Q9NXV2 234 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms