RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 CHKBQ9Y259 395 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 PRSS38A1L453 326 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 DXOO77932 396 aaKnown RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 JCHAINP01591 159 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 CYP2A6P11509 494 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 KELP23276 732 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 PTPN7P35236 360 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 STC1P52823 247 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 IFI35P80217 286 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 TAZQ16635 292 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 TIGD7Q6NT04 549 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 AADACL2Q6P093 401 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 NPNTQ6UXI9 565 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 RBM44Q6ZP01 1051 aaKnown RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 USP45Q70EL2 814 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 B3GNT8Q7Z7M8 397 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 GKN2Q86XP6 184 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 CCDC13Q8IYE1 715 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 CCNYQ8ND76 341 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 ATL2Q8NHH9 583 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 GLMNQ92990 594 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 HAUS1Q96CS2 278 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 OLFM3Q96PB7 478 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 BBC3Q96PG8 261 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 OSBPL9Q96SU4 736 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 ABCG8Q9H221 673 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 SPATS2LQ9NUQ6 558 aaKnown RBP12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 AMACRQ9UHK6 382 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 CD84Q9UIB8 345 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 SNX12Q9UMY4 172 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 DOLKQ9UPQ8 538 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 SLC17A4Q9Y2C5 497 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 EFR3BQ9Y2G0 817 aa12.65□□□□□ -0.38
SEC61A1-206ENST00000491668 GCN1Q92616 2671 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 CAPN8A6NHC0 703 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 TCEA3O75764 348 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 TUBB4AP04350 444 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 MX2P20592 715 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 CES1P23141 567 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 TEAD1P28347 426 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 NR2C2P49116 596 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 CCL7P80098 99 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 SKOR1P84550 965 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 ARHGEF7Q14155 803 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 LONRF2Q1L5Z9 754 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 BBS12Q6ZW61 710 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 TAF8Q7Z7C8 310 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 TRIM74Q86UV6 250 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 C17orf82Q86X59 251 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 FAM46DQ8NEK8 389 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 GPBAR1Q8TDU6 330 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 MAIP1Q8WWC4 291 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 SCG3Q8WXD2 468 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 EID2BQ96D98 161 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 SCARF2Q96GP6 870 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 TRIB3Q96RU7 358 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 NAP1L3Q99457 506 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 BRD8Q9H0E9 1235 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 CARS2Q9HA77 564 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 PHPT1Q9NRX4 125 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 SUFUQ9UMX1 484 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 SATB2Q9UPW6 733 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 PLEKHM1Q9Y4G2 1056 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 TTLL3Q9Y4R7 772 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 PCYT1BQ9Y5K3 369 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 SAR1BQ9Y6B6 198 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 RNF215Q9Y6U7 377 aa12.64□□□□□ -0.39
SEC61A1-206ENST00000491668 B4DGG1 531 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 APOC4-APOC2K7ER74 178 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 PPP1R12AO14974 1030 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 CLDN7O95471 211 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 APOC2P02655 101 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 FGGP02679 453 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 FGF1P05230 155 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 AK4P27144 223 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 ACTN2P35609 894 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 CD86P42081 329 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 GNPDA1P46926 289 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 TLE3Q04726 772 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 PDK1Q15118 436 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 QPCTQ16769 361 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 SOWAHCQ53LP3 525 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 C3orf38Q5JPI3 329 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 RAET1GQ6H3X3 334 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 IGF2-ASQ6U949 168 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 TMPRSS9Q7Z410 1059 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 SLC13A5Q86YT5 568 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 TTC13Q8NBP0 860 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 LPCAT1Q8NF37 534 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 TADA1Q96BN2 335 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 AP2M1Q96CW1 435 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms