RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PHPT1Q9NRX4 125 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 EVA1BQ9NVM1 165 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 OCIAD1Q9NX40 245 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 NCKIPSDQ9NZQ3 722 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 SEPT10Q9P0V9 454 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 APPL1Q9UKG1 709 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 SHOC2Q9UQ13 582 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 KCNK6Q9Y257 313 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 SLC17A4Q9Y2C5 497 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 SPO11Q9Y5K1 396 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 TEX51A0A1B0GUA7 166 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 LRRD1A4D1F6 860 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 CAPN8A6NHC0 703 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 GOLGA6L19H0YKK7 550 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 K7ENP7 123 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 TOR1BO14657 336 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 TNFRSF10CO14798 259 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 MATN3O15232 486 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 SNX2O60749 519 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 DNAJC6O75061 913 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 MT-CYBP00156 380 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-211ENST00000491581 ITGA2BP08514 1039 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 JMJD7P0C870 316 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 FGF3P11487 239 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-211ENST00000491581 CYP2A6P11509 494 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-211ENST00000491581 PECAM1P16284 738 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-211ENST00000491581 SERPINB6P35237 376 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 EPHB1P54762 984 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 PTPRCAPQ14761 206 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 SLC18A3Q16572 532 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 PYCR3Q53H96 274 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 BROXQ5VW32 411 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 PPP1R2P3Q6NXS1 205 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 INO80CQ6PI98 192 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-211ENST00000491581 CCDC81Q6ZN84 652 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 USP45Q70EL2 814 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 LSMEM2Q8N112 164 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 GPR26Q8NDV2 337 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 TPCN2Q8NHX9 752 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 SLC35G2Q8TBE7 412 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 SLC37A2Q8TED4 501 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 EXTL1Q92935 676 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 HAUS1Q96CS2 278 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 FAF2Q96CS3 445 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 COX14Q96I36 57 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 AGAP3Q96P47 875 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 RNF157Q96PX1 679 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 CTRCQ99895 268 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 HERPUD2Q9BSE4 406 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 TRIM4Q9C037 500 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 POLR1EQ9GZS1 481 aaKnown RBP8.85□□□□□ -0.99
HDAC3-211ENST00000491581 PCDH9Q9HC56 1237 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 TBC1D29Q9UFV1 150 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 SLC23A2Q9UGH3 650 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 KLHL3Q9UH77 587 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 ZNHIT2Q9UHR6 403 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 TMPRSS11EQ9UL52 423 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 PPIL1Q9Y3C6 166 aa8.85□□□□□ -0.99
HDAC3-211ENST00000491581 IGHV1OR21-1A0A087WYE8 117 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 C1orf232A0A0U1RR37 186 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 RHPN2P1A8MT19 583 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 BUD23O43709 281 aaKnown RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 KRT1P04264 644 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 HOXC4P09017 264 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ACP5P13686 325 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 CCNCP24863 283 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 CCKBRP32239 447 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 HSPA9P38646 679 aaKnown RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 CHRNA4P43681 627 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 MAPK9P45984 424 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 C19orf57Q0VDD7 668 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 AP1B1Q10567 949 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ILF3Q12906 894 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 NFATC2Q13469 925 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 OLIG2Q13516 323 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 IFI16Q16666 785 aaKnown RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 HADHQ16836 314 aaKnown RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ALG1LQ6GMV1 187 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 IGF2-ASQ6U949 168 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 CRTC3Q6UUV7 619 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 MFSD7Q6UXD7 560 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ADAMTSL4Q6UY14 1074 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 CCDC13Q8IYE1 715 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ATL2Q8NHH9 583 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 NSMCE1Q8WV22 266 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 CTNNBL1Q8WYA6 563 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 OR2M4Q96R27 311 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 TRIB3Q96RU7 358 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 FAM118BQ9BPY3 351 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ZNF670Q9BS34 389 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 TBC1D10AQ9BXI6 508 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 GSDMCQ9BYG8 508 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 APMAPQ9HDC9 416 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 BPIFA1Q9NP55 256 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 PRDM8Q9NQV8 689 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ABHD10Q9NUJ1 306 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 DONSONQ9NYP3 566 aa8.84□□□□□ -0.99
HDAC3-211ENST00000491581 SCHIP1Q9P0W5 487 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-211ENST00000491581 ATXN10Q9UBB4 475 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms