RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 KIAA1524Q8TCG1 905 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 TADA1Q96BN2 335 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 EID2BQ96D98 161 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 IMP4Q96G21 291 aaKnown RBP17.9■□□□□ 0.46
HMGN1-219ENST00000491183 AGAP3Q96P47 875 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 TRIB3Q96RU7 358 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 GOLPH3Q9H4A6 298 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 EPB41L5Q9HCM4 733 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 SAE1Q9UBE0 346 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-219ENST00000491183 PCYT1BQ9Y5K3 369 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-219ENST00000491183 ALG6Q9Y672 507 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 LOC400499M0QZD8 3231 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 C1orf232A0A0U1RR37 186 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 SPOPO43791 374 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 LCA5LO95447 670 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 PYGLP06737 847 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 CCKBRP32239 447 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 NOP2P46087 812 aaKnown RBP17.89■□□□□ 0.45
HMGN1-219ENST00000491183 ADCY2Q08462 1091 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 GALNT3Q14435 633 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 LLGL1Q15334 1064 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 MARK2Q7KZI7 788 aaKnown RBP17.89■□□□□ 0.45
HMGN1-219ENST00000491183 RAB11FIP2Q7L804 512 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 KDELC2Q7Z4H8 507 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 ZNF438Q7Z4V0 828 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 CLEC14AQ86T13 490 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 FBXO39Q8N4B4 442 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 KCNE4Q8WWG9 221 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 TMEM74Q96NL1 305 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 FCRL3Q96P31 734 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-219ENST00000491183 OR2M4Q96R27 311 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 ADGRE3Q9BY15 652 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 SEPT10Q9P0V9 454 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 SSUH2Q9Y2M2 353 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 OAS3Q9Y6K5 1087 aaKnown RBP17.89■□□□□ 0.45
HMGN1-219ENST00000491183 IGSF10Q6WRI0 2623 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 SCN8AQ9UQD0 1980 aa17.89■□□□□ 0.45
HMGN1-219ENST00000491183 ZFC3H1O60293 1989 aaKnown RBP17.88■□□□□ 0.45
HMGN1-219ENST00000491183 FADS2P1A8MWK0 482 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 TMX2-CTNND1H3BSU7 103 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 PLD2O14939 933 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 PPP1R12AO14974 1030 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-219ENST00000491183 DNAJC6O75061 913 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 ATP1A1P05023 1023 aaKnown RBP17.88■□□□□ 0.45
HMGN1-219ENST00000491183 HGFP14210 728 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 UGT1A5P35504 534 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 OR1D5P58170 312 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 ODF2Q5BJF6 829 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 HENMT1Q5T8I9 393 aaKnown RBP17.88■□□□□ 0.45
HMGN1-219ENST00000491183 LYSMD3Q7Z3D4 306 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 NT5DC3Q86UY8 548 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 SPATA22Q8NHS9 363 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 DPH1Q9BZG8 443 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 BRD8Q9H0E9 1235 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 SLC25A51Q9H1U9 297 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 FAM83DQ9H4H8 585 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 PCDHA13Q9Y5I0 950 aa17.88■□□□□ 0.45
HMGN1-219ENST00000491183 PPM1DO15297 605 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 KLK10O43240 276 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 CST8O60676 142 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 ASMTLO95671 621 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 ITGA2BP08514 1039 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 PIRTP0C851 137 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 PECAM1P16284 738 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-219ENST00000491183 ACTR1BP42025 376 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 MLLT3P42568 568 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-219ENST00000491183 ACTR1AP61163 376 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 EIF3IQ13347 325 aaKnown RBP17.87■□□□□ 0.45
HMGN1-219ENST00000491183 NR1D2Q14995 579 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 PRKD1Q15139 912 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-219ENST00000491183 TEX44Q53QW1 395 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 SPOCD1Q6ZMY3 1216 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 SLITRK4Q8IW52 837 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 CCHCR1Q8TD31 782 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 STRADBQ9C0K7 418 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 CDH19Q9H159 772 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 GLOD4Q9HC38 313 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 PKD2L2Q9NZM6 624 aa17.87■□□□□ 0.45
HMGN1-219ENST00000491183 RGSL1A5PLK6 1076 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 RHPN2P1A8MT19 583 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 AGRPO00253 132 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 PSTPIP1O43586 416 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 EML2O95834 649 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 MT-CYBP00156 380 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-219ENST00000491183 PTPN3P26045 913 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 ALDH4A1P30038 563 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 CD68P34810 354 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-219ENST00000491183 NR2C2P49116 596 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 CXADRP78310 365 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 CDK18Q07002 472 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 WASHC5Q12768 1159 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 COL9A2Q14055 689 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-219ENST00000491183 TFDP2Q14188 446 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 PCSK7Q16549 785 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 KAZNQ674X7 775 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 ZNF574Q6ZN55 896 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-219ENST00000491183 USP53Q70EK8 1073 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 GPR155Q7Z3F1 870 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 TMC3Q7Z5M5 1100 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 GALNT13Q8IUC8 556 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms