RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 GPR88Q9GZN0 384 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MIS12Q9H081 205 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM117Q9H0C3 514 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 INTS2Q9H0H0 1204 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 C1orf21Q9H246 121 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 VPS33BQ9H267 617 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 LHX5Q9H2C1 402 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CDC42EP4Q9H3Q1 356 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TRABDQ9H4I3 376 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SYNCQ9H7C4 482 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PRDM16Q9HAZ2 1276 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 USP29Q9HBJ7 922 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM8AQ9HCN3 771 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 POLD4Q9HCU8 107 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ERVK-5Q9HDB9 667 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NRBP2Q9NSY0 501 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SACM1LQ9NTJ5 587 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 POT1Q9NUX5 634 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SEPT11Q9NVA2 429 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 DDX43Q9NXZ2 648 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 DDX56Q9NY93 547 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ADAM22Q9P0K1 906 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 LPAR3Q9UBY5 353 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF212Q9UDV6 495 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 KIAA1257Q9ULG3 409 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TBX20Q9UMR3 447 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PHTF1Q9UMS5 762 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 COG5Q9UP83 839 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF148Q9UQR1 794 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 L3MBTL1Q9Y468 752 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PCDHA10Q9Y5I2 948 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 UBIAD1Q9Y5Z9 338 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SQORQ9Y6N5 450 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ASTN1O14525 1302 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 AFF2P51816 1311 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FRMPD4Q14CM0 1322 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF335Q9H4Z2 1342 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GLI3P10071 1580 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 COL22A1Q8NFW1 1626 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PLCH1Q4KWH8 1693 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 KIAA1217Q5T5P2 1943 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 COL1A1P02452 1464 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TOGARAM1Q9Y4F4 1720 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TRIP11Q15643 1979 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 IQANK1A0A1B0GTG1 560 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CFAP69A5D8W1 941 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 DPPA5A6NC42 116 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 DDTLA6NHG4 134 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CGB1A6NKQ9 187 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SIGLEC16A6NMB1 481 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM110-MUSTN1A8MSY1 372 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 RSPH10B2B2RC85 870 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TISP43B9A030 160 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 H0YIN7 160 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 H3BNC9 293 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 FZD9O00144 591 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 DNALI1O14645 258 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 KLF11O14901 512 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 DCLK1O15075 740 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TP73O15350 636 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 BIRC5O15392 142 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 GYG2O15488 501 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CLDN3O15551 220 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PSTPIP1O43586 416 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 STRNO43815 780 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 AHCYL1O43865 530 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 EXTL3O43909 919 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TYROBPO43914 113 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SNX2O60749 519 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TOM1O60784 492 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 EDF1O60869 148 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SMIM24O75264 130 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 FKBP6O75344 327 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CSDE1O75534 798 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SPAG6O75602 509 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 STAM2O75886 525 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 USP1O94782 785 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PROSCO94903 275 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 ACSL3O95573 720 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 NDUFB10O96000 172 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 MT-ND3P03897 115 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CALB1P05937 261 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 KRT7P08729 469 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 KRT16P08779 473 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SNRPAP09012 282 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM191BP0C7N4 346 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 RSPH10BP0C881 870 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TPBGLP0DKB5 382 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TROVE2P10155 538 aaKnown RBP eCLIP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 NEFHP12036 1026 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 MYCLP12524 364 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TNNI1P19237 187 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CA4P22748 312 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TBXAS1P24557 533 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 KLRC2P26717 231 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 HTR1BP28222 390 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PPIFP30405 207 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 ADSSP30520 456 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC7A1P30825 629 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms