RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 NUDT22Q9BRQ3 303 aa19.62■□□□□ 0.73
SREBF1-216ENST00000490796 RIOK2Q9BVS4 552 aaKnown RBP19.62■□□□□ 0.73
SREBF1-216ENST00000490796 TDRD1Q9BXT4 1180 aaKnown RBP19.62■□□□□ 0.73
SREBF1-216ENST00000490796 KCNK4Q9NYG8 393 aa19.62■□□□□ 0.73
SREBF1-216ENST00000490796 IFNKQ9P0W0 207 aa19.62■□□□□ 0.73
SREBF1-216ENST00000490796 UVRAGQ9P2Y5 699 aa19.62■□□□□ 0.73
SREBF1-216ENST00000490796 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.62■□□□□ 0.732e-8■■■□□ 15.9
SREBF1-216ENST00000490796 HGSO14964 777 aaPredicted RBP19.61■□□□□ 0.73
SREBF1-216ENST00000490796 INPP4BO15327 924 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 STC1P52823 247 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 RPL26P61254 145 aaKnown RBP19.61■□□□□ 0.73
SREBF1-216ENST00000490796 LRP8Q14114 963 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 NR1D2Q14995 579 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 C16orf72Q14CZ0 275 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 TRIM74Q86UV6 250 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 ZFAND4Q86XD8 727 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 NAGSQ8N159 534 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 CCHCR1Q8TD31 782 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 FATE1Q969F0 183 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 AHCYL2Q96HN2 611 aaKnown RBP19.61■□□□□ 0.73
SREBF1-216ENST00000490796 SMIM14Q96QK8 99 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 DPYSL5Q9BPU6 564 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 SEMA4CQ9C0C4 833 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 DEF6Q9H4E7 631 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 PCDH9Q9HC56 1237 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 ZNHIT2Q9UHR6 403 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 RPL26L1Q9UNX3 145 aaKnown RBP19.61■□□□□ 0.73
SREBF1-216ENST00000490796 SPTA1P02549 2419 aa19.61■□□□□ 0.73
SREBF1-216ENST00000490796 J3QKU1 62 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 EFSO43281 561 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 ZIC2O95409 532 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-216ENST00000490796 GYPCP04921 128 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 CD1CP29017 333 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 CASP14P31944 242 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 CSTF2P33240 577 aaKnown RBP eCLIP19.6■□□□□ 0.73
SREBF1-216ENST00000490796 ARSEP51690 589 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 TRA2AQ13595 282 aaKnown RBP eCLIP19.6■□□□□ 0.73
SREBF1-216ENST00000490796 PYCR3Q53H96 274 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 NKAIN2Q5VXU1 208 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 ALG1LQ6GMV1 187 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 CCDC13Q8IYE1 715 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 RCBTB1Q8NDN9 531 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 SCARF2Q96GP6 870 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-216ENST00000490796 CCDC74BQ96LY2 380 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 SLC38A3Q99624 504 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 B3GNT4Q9C0J1 378 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 STN1Q9H668 368 aaKnown RBP19.6■□□□□ 0.73
SREBF1-216ENST00000490796 PKD2L2Q9NZM6 624 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 FOXJ2Q9P0K8 574 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 PLEKHM1Q9Y4G2 1056 aa19.6■□□□□ 0.73
SREBF1-216ENST00000490796 TRBV23OR9-2A0A075B6M9 112 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 IGHV5-10-1A0A0J9YXX1 117 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 C1orf232A0A0U1RR37 186 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 B8ZZF3 427 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 C9orf172C9J069 976 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 PPM1DO15297 605 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 CLDN7O95471 211 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 SOD1P00441 154 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 HLA-DQB2P05538 268 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 ATP1A2P50993 1020 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 VASH2Q86V25 355 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 RAVER1Q8IY67 606 aaKnown RBP19.59■□□□□ 0.73
SREBF1-216ENST00000490796 AGBL5Q8NDL9 886 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 OR4D9Q8NGE8 314 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-216ENST00000490796 TAAR9Q96RI9 348 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 AGAP2Q99490 1192 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
SREBF1-216ENST00000490796 ZNHIT6Q9NWK9 470 aaKnown RBP19.59■□□□□ 0.73
SREBF1-216ENST00000490796 STMND1H3BQB6 276 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 JCHAINP01591 159 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 CCL4P13236 92 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 LIMK2P53671 638 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 TAS2R40P59535 323 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 GPLD1P80108 840 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 GBE1Q04446 702 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 ODF2Q5BJF6 829 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 XKR5Q6UX68 686 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 ZNF574Q6ZN55 896 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-216ENST00000490796 CHST15Q7LFX5 561 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-216ENST00000490796 CPNE8Q86YQ8 564 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 OR10G6Q8NH81 332 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 ARRDC2Q8TBH0 407 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 MLPHQ9BV36 600 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-216ENST00000490796 MAK16Q9BXY0 300 aaKnown RBP19.58■□□□□ 0.72
SREBF1-216ENST00000490796 ADGRE3Q9BY15 652 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 FAM83DQ9H4H8 585 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 ST14Q9Y5Y6 855 aa19.58■□□□□ 0.72
SREBF1-216ENST00000490796 SCN8AQ9UQD0 1980 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 IGHV1OR21-1A0A087WYE8 117 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 ATP1A1P05023 1023 aaKnown RBP19.57■□□□□ 0.72
SREBF1-216ENST00000490796 MPSTP25325 297 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 CD86P42081 329 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 NIPAL4Q0D2K0 466 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 SRSF6Q13247 344 aaKnown RBP19.57■□□□□ 0.72
SREBF1-216ENST00000490796 MESDQ14696 234 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 SLC18A3Q16572 532 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 SLC37A2Q8TED4 501 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 LRRN4Q8WUT4 740 aa19.57■□□□□ 0.72
SREBF1-216ENST00000490796 HDAC11Q96DB2 347 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms