RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 GPR26Q8NDV2 337 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 LPCAT1Q8NF37 534 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 SPATA22Q8NHS9 363 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 TTC9Q92623 222 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 GRAMD1AQ96CP6 724 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 FCRL3Q96P31 734 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 NUDT22Q9BRQ3 303 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 RIOK2Q9BVS4 552 aaKnown RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 CPNE5Q9HCH3 593 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 PHPT1Q9NRX4 125 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 TMEM9Q9P0T7 183 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 RPL26L1Q9UNX3 145 aaKnown RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 TMEM98Q9Y2Y6 226 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 hCG_1818297A0A087WSY0 165 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 A0A0U1RQJ8 604 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 ANKRD66B4E2M5 251 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 GPR39O43194 453 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 CBFA2T2O43439 604 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 AKR1B10O60218 316 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 ECEL1O95672 775 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 KRT10P13645 584 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 CTSEP14091 401 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 WT1P19544 449 aaPredicted RBP11.74□□□□□ -0.53
SRSF4-204ENST00000489898 ITIH1P19827 911 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 KELP23276 732 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 UGT1A5P35504 534 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 SSR1P43307 286 aaKnown RBP11.74□□□□□ -0.53
SRSF4-204ENST00000489898 RPIAP49247 311 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 DCDC1P59894 354 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 COL9A2Q14055 689 aaPredicted RBP11.74□□□□□ -0.53
SRSF4-204ENST00000489898 SKOR2Q2VWA4 1001 aaPredicted RBP11.74□□□□□ -0.53
SRSF4-204ENST00000489898 HS1BP3Q53T59 392 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.74□□□□□ -0.53
SRSF4-204ENST00000489898 MICALCLQ6ZW33 695 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 GAS2L3Q86XJ1 694 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 ARL14Q8N4G2 192 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 TTC30BQ8N4P2 665 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF248Q8NDW4 579 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 ATL2Q8NHH9 583 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 WDR36Q8NI36 951 aaKnown RBP11.74□□□□□ -0.53
SRSF4-204ENST00000489898 WDR48Q8TAF3 677 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 AP2M1Q96CW1 435 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 OXNAD1Q96HP4 312 aaPredicted RBP11.74□□□□□ -0.53
SRSF4-204ENST00000489898 OR2M4Q96R27 311 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 SEMA6CQ9H3T2 930 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 FOXJ2Q9P0K8 574 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 GULP1Q9UBP9 304 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 LCMT1Q9UIC8 334 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 HEY1Q9Y5J3 304 aa11.74□□□□□ -0.53
SRSF4-204ENST00000489898 NBPF19A0A087WUL8 3843 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 C9orf172C9J069 976 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 ATXN7O15265 892 aaPredicted RBP11.73□□□□□ -0.53
SRSF4-204ENST00000489898 PSTPIP1O43586 416 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 ATP1A1P05023 1023 aaKnown RBP11.73□□□□□ -0.53
SRSF4-204ENST00000489898 PIRTP0C851 137 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 MX2P20592 715 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 CD1CP29017 333 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 MLLT3P42568 568 aaPredicted RBP11.73□□□□□ -0.53
SRSF4-204ENST00000489898 FASLGP48023 281 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 MSLNQ13421 630 aaPredicted RBP11.73□□□□□ -0.53
SRSF4-204ENST00000489898 C11orf63Q6NUN7 778 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 DOK6Q6PKX4 331 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 SLC30A9Q6PML9 568 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 RAD9BQ6WBX8 426 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 SPOCD1Q6ZMY3 1216 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 TAF8Q7Z7C8 310 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 C11orf96Q7Z7L8 435 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF547Q8IVP9 402 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 KLHDC8BQ8IXV7 354 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 NRSN1Q8IZ57 195 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 BBS5Q8N3I7 341 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 BMPERQ8N8U9 685 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 SLC37A2Q8TED4 501 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 ZDHHC1Q8WTX9 485 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 PCSK5Q92824 1860 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
SRSF4-204ENST00000489898 QKIQ96PU8 341 aaKnown RBP eCLIP11.73□□□□□ -0.53
SRSF4-204ENST00000489898 GFM1Q96RP9 751 aaKnown RBP11.73□□□□□ -0.53
SRSF4-204ENST00000489898 SEMA4CQ9C0C4 833 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 RBSNQ9H1K0 784 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 SLC25A51Q9H1U9 297 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 RDH14Q9HBH5 336 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 EVA1BQ9NVM1 165 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 KCTD5Q9NXV2 234 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 VPS18Q9P253 973 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 LRIT1Q9P2V4 623 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF711Q9Y462 761 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 TTLL3Q9Y4R7 772 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 PCDHGA7Q9Y5G6 932 aa11.73□□□□□ -0.53
SRSF4-204ENST00000489898 IGHV1OR21-1A0A087WYE8 117 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 A0A0A6YYK5 440 aaPredicted RBP11.72□□□□□ -0.53
SRSF4-204ENST00000489898 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 AKR1B15C9JRZ8 316 aaPredicted RBP11.72□□□□□ -0.53
SRSF4-204ENST00000489898 APOL1O14791 398 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 PLD2O14939 933 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 CHUKO15111 745 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms