RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 BMPR1BO00238 502 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 KRT36O76013 467 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 MBD4O95243 580 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 CDH1P12830 882 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 RRM1P23921 792 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 APOBEC1P41238 236 aaKnown RBP5.09□□□□□ -1.59
CCDC39-206ENST00000489868 ISL1P61371 349 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 GPATCH4Q5T3I0 446 aaKnown RBP5.09□□□□□ -1.59
CCDC39-206ENST00000489868 STXBP5Q5T5C0 1151 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 FRG2Q64ET8 278 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 MEX3BQ6ZN04 569 aaKnown RBP5.09□□□□□ -1.59
CCDC39-206ENST00000489868 ATG9AQ7Z3C6 839 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 CPLX4Q7Z7G2 160 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 DSG4Q86SJ6 1040 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 DNASE2BQ8WZ79 361 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 SMARCE1Q969G3 411 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 FAM149B1Q96BN6 582 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 PDCL3Q9H2J4 239 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 SDF2L1Q9HCN8 221 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 RANGRFQ9HD47 186 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-206ENST00000489868 IRAK4Q9NWZ3 460 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 AASSQ9UDR5 926 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 LIMA1Q9UHB6 759 aaKnown RBP5.09□□□□□ -1.59
CCDC39-206ENST00000489868 ACSL5Q9ULC5 683 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 AMDHD2Q9Y303 409 aa5.09□□□□□ -1.59
CCDC39-206ENST00000489868 CAMTA2O94983 1202 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 KCNK5O95279 499 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 TAS2R38P59533 333 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 RUNX1T1Q06455 604 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 DECR1Q16698 335 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 BRAT1Q6PJG6 821 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 RAD9BQ6WBX8 426 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 Q6ZTC4 211 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 FOXL2NBQ6ZUU3 175 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 GSTA5Q7RTV2 222 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 PXKQ7Z7A4 578 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 SLC9B2Q86UD5 537 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 MAGEC3Q8TD91 643 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 UCMAQ8WVF2 138 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 ARHGEF26Q96DR7 871 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 TMEM68Q96MH6 324 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 PDZD7Q9H5P4 517 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 PLEKHA5Q9HAU0 1116 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 ORC3Q9UBD5 711 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-206ENST00000489868 OR2W1Q9Y3N9 320 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 CLIC4Q9Y696 253 aa5.08□□□□□ -1.6
CCDC39-206ENST00000489868 LILRA5A6NI73 299 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 EPB41L2O43491 1005 aaKnown RBP5.07□□□□□ -1.6
CCDC39-206ENST00000489868 IGLV2-11P01706 119 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 UMODP07911 640 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 AMD1P17707 334 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 TNFAIP3P21580 790 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 MCM3P25205 808 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 CLDN20P56880 219 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 PDE1BQ01064 536 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 POU3F1Q03052 451 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-206ENST00000489868 FOXM1Q08050 763 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 CCDC96Q2M329 555 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 LRIF1Q5T3J3 769 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 USP43Q70EL4 1123 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 CACNA2D4Q7Z3S7 1137 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 RNF113BQ8IZP6 322 aaKnown RBP5.07□□□□□ -1.6
CCDC39-206ENST00000489868 FRMD1Q8N878 549 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 CD101Q93033 1021 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 MPP4Q96JB8 637 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 NODALQ96S42 347 aa5.07□□□□□ -1.6
CCDC39-206ENST00000489868 M0QZ24 198 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 ATP2A1O14983 1001 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 SPINT2O43291 252 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 IPO7O95373 1038 aaKnown RBP5.06□□□□□ -1.6
CCDC39-206ENST00000489868 MAPK4P31152 587 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 HOXC9P31274 260 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 FASLGP48023 281 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 GRIK2Q13002 908 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 KRT32Q14532 448 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 SNX30Q5VWJ9 437 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 C18orf63Q68DL7 685 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 CLEC17AQ6ZS10 378 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 SEPT14Q6ZU15 432 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 ASB18Q6ZVZ8 466 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 EXOC3L1Q86VI1 746 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 ARHGAP12Q8IWW6 846 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.06□□□□□ -1.6
CCDC39-206ENST00000489868 SLC38A5Q8WUX1 472 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 SLC44A1Q8WWI5 657 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 TAAR8Q969N4 342 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 INPP4AQ96PE3 977 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-206ENST00000489868 PIGMQ9H3S5 423 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 COPG2Q9UBF2 871 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 MAU2Q9Y6X3 613 aa5.06□□□□□ -1.6
CCDC39-206ENST00000489868 LIPT2A6NK58 231 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 JRKO75564 520 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 EIF2S1P05198 315 aaKnown RBP5.05□□□□□ -1.6
CCDC39-206ENST00000489868 HSPA1AP0DMV8 641 aaKnown RBP5.05□□□□□ -1.6
CCDC39-206ENST00000489868 HSPA1BP0DMV9 641 aaKnown RBP5.05□□□□□ -1.6
CCDC39-206ENST00000489868 UBA1P22314 1058 aaKnown RBP5.05□□□□□ -1.6
CCDC39-206ENST00000489868 MAN1A1P33908 653 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 UBA7P41226 1012 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 TROAPQ12815 778 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 SOWAHCQ53LP3 525 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms