RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 MAP4P27816 1152 aaKnown RBP16.86■□□□□ 0.29
TOP3B-217ENST00000489581 FASLGP48023 281 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 ZNF135P52742 658 aaPredicted RBP16.86■□□□□ 0.29
TOP3B-217ENST00000489581 CDC20Q12834 499 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 DEFB109BQ30KR1 87 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 LRRC66Q68CR7 880 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 ARHGAP22Q7Z5H3 698 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 GALNT13Q8IUC8 556 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 PSTKQ8IV42 348 aaKnown RBP16.86■□□□□ 0.29
TOP3B-217ENST00000489581 BBS5Q8N3I7 341 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 SFRP1Q8N474 314 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 NCSTNQ92542 709 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 AGAP2Q99490 1192 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 SYT11Q9BT88 431 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 APMAPQ9HDC9 416 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 PPIL1Q9Y3C6 166 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 PRKAB1Q9Y478 270 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 ICE1Q9Y2F5 2266 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 SPTAN1Q13813 2472 aaKnown RBP16.86■□□□□ 0.29
TOP3B-217ENST00000489581 USP9YO00507 2555 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-217ENST00000489581 H3BRJ5 948 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 INPP4BO15327 924 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 ASMTLO95671 621 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 IL1R2P27930 398 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 OAS2P29728 719 aaKnown RBP16.85■□□□□ 0.29
TOP3B-217ENST00000489581 ARL4AP40617 200 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 MMP13P45452 471 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 HHEXQ03014 270 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 PTSQ03393 145 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 NFATC2Q13469 925 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 NCAPHQ15003 741 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 SMTNL2Q2TAL5 461 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-217ENST00000489581 ATP1A1-AS1Q5TC04 95 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 MARC1Q5VT66 337 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 C16orf46Q6P387 395 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 TMCO3Q6UWJ1 677 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 CEACAM20Q6UY09 585 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 KDELC2Q7Z4H8 507 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 NSMCE1Q8WV22 266 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 ABHD17AQ96GS6 310 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 CNOT8Q9UFF9 292 aaKnown RBP16.85■□□□□ 0.29
TOP3B-217ENST00000489581 KLHL3Q9UH77 587 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 ZNHIT2Q9UHR6 403 aa16.85■□□□□ 0.29
TOP3B-217ENST00000489581 PCYT1BQ9Y5K3 369 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-217ENST00000489581 STK17BO94768 372 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 FTLP02792 175 aaPredicted RBP16.84■□□□□ 0.29
TOP3B-217ENST00000489581 TCF4P15884 667 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 CDK11BP21127 795 aaKnown RBP16.84■□□□□ 0.29
TOP3B-217ENST00000489581 MAPK9P45984 424 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 ITKQ08881 620 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 ABHD18Q0P651 414 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 RALGPS1Q5JS13 557 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 PPP1R2P3Q6NXS1 205 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 WDR74Q6RFH5 385 aaPredicted RBP16.84■□□□□ 0.29
TOP3B-217ENST00000489581 CHST15Q7LFX5 561 aaPredicted RBP16.84■□□□□ 0.29
TOP3B-217ENST00000489581 POLNQ7Z5Q5 900 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 LURAP1LQ8IV03 231 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 ATPAF2Q8N5M1 289 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 APOBEC4Q8WW27 367 aaKnown RBP16.84■□□□□ 0.29
TOP3B-217ENST00000489581 HSPH1Q92598 858 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 RNF31Q96EP0 1072 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 EFHD1Q9BUP0 239 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 NT5MQ9NPB1 228 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 FBXO8Q9NRD0 319 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 CHMP5Q9NZZ3 219 aa16.84■□□□□ 0.29
TOP3B-217ENST00000489581 LRRC10BA6NIK2 292 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 ATP1A1P05023 1023 aaKnown RBP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 GP1BBP13224 206 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 TCN2P20062 427 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 MAN1A1P33908 653 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 LRP8Q14114 963 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 DPYSL2Q16555 572 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 APTXQ7Z2E3 356 aaKnown RBP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 NDUFAF2Q8N183 169 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 EXD1Q8NHP7 514 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 STARD8Q92502 1023 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 ZNF653Q96CK0 615 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 COX14Q96I36 57 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 CSPG4P5Q96PW8 444 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 ZPBPQ9BS86 351 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 RIOK2Q9BVS4 552 aaKnown RBP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 SARS2Q9NP81 518 aaKnown RBP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 MYO1AQ9UBC5 1043 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 TBC1D29Q9UFV1 150 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 KCNK6Q9Y257 313 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 PLAAQ9Y263 795 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 TMEM184BQ9Y519 407 aaPredicted RBP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 GTF3C3Q9Y5Q9 886 aa16.83■□□□□ 0.28
TOP3B-217ENST00000489581 MRPS18BQ9Y676 258 aaKnown RBP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 OAS3Q9Y6K5 1087 aaKnown RBP16.83■□□□□ 0.28
TOP3B-217ENST00000489581 USP9XQ93008 2570 aaPredicted RBP16.82■□□□□ 0.28
TOP3B-217ENST00000489581 CLEC18AA5D8T8 446 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 FZD6O60353 706 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 SNX2O60749 519 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 DNAJC6O75061 913 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 NTRK1P04629 796 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 ATP1A3P13637 1013 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 EPHB1P54762 984 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms