RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SULT1E1P49888 294 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 SKOR2Q2VWA4 1001 aaPredicted RBP14.89□□□□□ -0.03
UFD1-209ENST00000489406 AFMIDQ63HM1 303 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 FAM183BPQ6ZVS7 135 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 Q71RC1 249 aaPredicted RBP14.89□□□□□ -0.03
UFD1-209ENST00000489406 MARK2Q7KZI7 788 aaKnown RBP14.89□□□□□ -0.03
UFD1-209ENST00000489406 ZNF354CQ86Y25 554 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 CAMK1DQ8IU85 385 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 ENDOVQ8N8Q3 282 aaKnown RBP14.89□□□□□ -0.03
UFD1-209ENST00000489406 TM9SF4Q92544 642 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 INTS4Q96HW7 963 aaKnown RBP14.89□□□□□ -0.03
UFD1-209ENST00000489406 NT5C1BQ96P26 610 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 NPY6RQ99463 290 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 CHST8Q9H2A9 424 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 ZNF552Q9H707 407 aaPredicted RBP14.89□□□□□ -0.03
UFD1-209ENST00000489406 SEMA3GQ9NS98 782 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 CNOT8Q9UFF9 292 aaKnown RBP14.89□□□□□ -0.03
UFD1-209ENST00000489406 RARRES3Q9UL19 164 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 TMEM98Q9Y2Y6 226 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 CSAG2Q9Y5P2 127 aa14.89□□□□□ -0.03
UFD1-209ENST00000489406 PIKFYVEQ9Y2I7 2098 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 GOLGA6CA6NDK9 693 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 GOLGA6BA6NDN3 693 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 CCL21O00585 134 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 KDELR3O43731 214 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 JRKO75564 520 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 LETM1O95202 739 aaPredicted RBP14.88□□□□□ -0.03
UFD1-209ENST00000489406 GOLGA6DP0CG33 693 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 KCNK10P57789 538 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 DEUP1Q05D60 604 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 MYBPC3Q14896 1274 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 DCAF10Q5QP82 559 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 IYDQ6PHW0 289 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 PHLDB2Q86SQ0 1253 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 SLC9B2Q86UD5 537 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 FNIP1Q8TF40 1166 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 NUS1Q96E22 293 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 CPXM1Q96SM3 734 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 MAGEH1Q9H213 219 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 GOLGA6AQ9NYA3 693 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 LHX3Q9UBR4 397 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 ZNHIT2Q9UHR6 403 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 TCFL5Q9UL49 500 aa14.88□□□□□ -0.03
UFD1-209ENST00000489406 NOVA2Q9UNW9 492 aaKnown RBP14.88□□□□□ -0.03
UFD1-209ENST00000489406 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.88□□□□□ -0.03
UFD1-209ENST00000489406 TRGV8A0A0C4DH27 118 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 A0A1W2PQJ5 194 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 EPB41P11171 864 aaKnown RBP14.87□□□□□ -0.03
UFD1-209ENST00000489406 Q0VFX4 171 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 TUBB3Q13509 450 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 PYCR3Q53H96 274 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 ACBD5Q5T8D3 534 aaPredicted RBP14.87□□□□□ -0.03
UFD1-209ENST00000489406 CACHD1Q5VU97 1274 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 IZUMO3Q5VZ72 239 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 RPTNQ6XPR3 784 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 DPPA4Q7L190 304 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 ZNF765Q7L2R6 523 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 RRAGAQ7L523 313 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 CXXC5Q7LFL8 322 aaKnown RBP14.87□□□□□ -0.03
UFD1-209ENST00000489406 PRIMA1Q86XR5 153 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 CHDHQ8NE62 594 aaPredicted RBP14.87□□□□□ -0.03
UFD1-209ENST00000489406 SCARF2Q96GP6 870 aaPredicted RBP14.87□□□□□ -0.03
UFD1-209ENST00000489406 ZNF641Q96N77 438 aaPredicted RBP14.87□□□□□ -0.03
UFD1-209ENST00000489406 SLX1AQ9BQ83 275 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 PPARGC1AQ9UBK2 798 aaKnown RBP14.87□□□□□ -0.03
UFD1-209ENST00000489406 TBC1D29Q9UFV1 150 aa14.87□□□□□ -0.03
UFD1-209ENST00000489406 RAMP2O60895 175 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 AMD1P17707 334 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 GPS2Q13227 327 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 GRM3Q14832 879 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 ASIC2Q16515 512 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 INO80DQ53TQ3 878 aaPredicted RBP14.86□□□□□ -0.03
UFD1-209ENST00000489406 DENND2CQ68D51 928 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 LCN10Q6JVE6 187 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 RWDD4Q6NW29 188 aaKnown RBP14.86□□□□□ -0.03
UFD1-209ENST00000489406 CYB5D1Q6P9G0 228 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 OLFML1Q6UWY5 402 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
UFD1-209ENST00000489406 DNAAF5Q86Y56 855 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 GALNT16Q8N428 558 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 PAF1Q8N7H5 531 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 LINC00301Q8NCQ3 95 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 ZNF606Q8WXB4 792 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 CASKIN2Q8WXE0 1202 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 KLHL6Q8WZ60 621 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 COQ10AQ96MF6 247 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 FCRL4Q96PJ5 515 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 TBCBQ99426 244 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 METTL14Q9HCE5 456 aaKnown RBP14.86□□□□□ -0.03
UFD1-209ENST00000489406 WASH6PQ9NQA3 447 aa14.86□□□□□ -0.03
UFD1-209ENST00000489406 LILRA5A6NI73 299 aa14.85□□□□□ -0.03
UFD1-209ENST00000489406 MED7O43513 233 aa14.85□□□□□ -0.03
UFD1-209ENST00000489406 SNX2O60749 519 aa14.85□□□□□ -0.03
UFD1-209ENST00000489406 IPO13O94829 963 aaKnown RBP14.85□□□□□ -0.03
UFD1-209ENST00000489406 UBXN7O94888 489 aa14.85□□□□□ -0.03
UFD1-209ENST00000489406 KRT5P13647 590 aa14.85□□□□□ -0.03
UFD1-209ENST00000489406 FOLR1P15328 257 aa14.85□□□□□ -0.03
UFD1-209ENST00000489406 NELFEP18615 380 aaKnown RBP14.85□□□□□ -0.03
UFD1-209ENST00000489406 PBX1P40424 430 aa14.85□□□□□ -0.03
UFD1-209ENST00000489406 MAPKAPK2P49137 400 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms