RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 B3GALT1Q9Y5Z6 326 aa9.32□□□□□ -0.92
SNX17-207ENST00000489402 MAST4O15021 2626 aa9.32□□□□□ -0.92
SNX17-207ENST00000489402 HECTD1Q9ULT8 2610 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 FLNCQ14315 2725 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 B4E171 279 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 GOLGA6L22H0YM25 854 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 CAPN5O15484 640 aaPredicted RBP9.31□□□□□ -0.92
SNX17-207ENST00000489402 RAD1O60671 282 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 ASMTLO95671 621 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 PEX11BO96011 259 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 SLC2A4P14672 509 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 LIFP15018 202 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 CA4P22748 312 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 MPSTP25325 297 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 IL1R2P27930 398 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 CSF2RBP32927 897 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 TSPAN7P41732 249 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 NOP2P46087 812 aaKnown RBP9.31□□□□□ -0.92
SNX17-207ENST00000489402 CCR10P46092 362 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 FASLGP48023 281 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 POLE2P56282 527 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 TLE1Q04724 770 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 PIGHQ14442 188 aaPredicted RBP9.31□□□□□ -0.92
SNX17-207ENST00000489402 KRT81Q14533 505 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 CLCA4Q14CN2 919 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 FILIP1LQ4L180 1135 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 PYCR3Q53H96 274 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 SNAP47Q5SQN1 464 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 LRRC66Q68CR7 880 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 TXNRD3NBQ6F5E7 133 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 MARK2Q7KZI7 788 aaKnown RBP9.31□□□□□ -0.92
SNX17-207ENST00000489402 ZNF765Q7L2R6 523 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 ZNF571Q7Z3V5 609 aaPredicted RBP9.31□□□□□ -0.92
SNX17-207ENST00000489402 TECPR1Q7Z6L1 1165 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 CPNE8Q86YQ8 564 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 LRRC49Q8IUZ0 686 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 SLC37A2Q8TED4 501 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 CATSPER2Q96P56 530 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 CSPG4P5Q96PW8 444 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 EFHD1Q9BUP0 239 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 POLR1EQ9GZS1 481 aaKnown RBP9.31□□□□□ -0.92
SNX17-207ENST00000489402 ABCG8Q9H221 673 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 AIPL1Q9NZN9 384 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 TMEM9Q9P0T7 183 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 TUBD1Q9UJT1 453 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 TMEM98Q9Y2Y6 226 aa9.31□□□□□ -0.92
SNX17-207ENST00000489402 PCYT1BQ9Y5K3 369 aaPredicted RBP9.31□□□□□ -0.92
SNX17-207ENST00000489402 TRBV23OR9-2A0A075B6M9 112 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 A0A0J9YYE9 177 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 A8MU76 341 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 DDX3XO00571 662 aaKnown RBP eCLIP9.3□□□□□ -0.921e-10■■■□□ 17.5
SNX17-207ENST00000489402 INPP4BO15327 924 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 SOD1P00441 154 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 TRBC1P01850 177 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 RARAP10276 462 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 PRKCIP41743 596 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 HHEXQ03014 270 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 KCNAB2Q13303 367 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 CCDC122Q5T0U0 273 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 ANKS6Q68DC2 871 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 TIGD7Q6NT04 549 aaPredicted RBP9.3□□□□□ -0.92
SNX17-207ENST00000489402 CEACAM20Q6UY09 585 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 TRIM74Q86UV6 250 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 NLRP8Q86W28 1048 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 ZNF761Q86XN6 746 aaPredicted RBP9.3□□□□□ -0.92
SNX17-207ENST00000489402 NLGN4XQ8N0W4 816 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 SFRP1Q8N474 314 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 NLGN4YQ8NFZ3 816 aaPredicted RBP9.3□□□□□ -0.92
SNX17-207ENST00000489402 EXD1Q8NHP7 514 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 ZNF564Q8TBZ8 553 aaPredicted RBP9.3□□□□□ -0.92
SNX17-207ENST00000489402 LRRN4Q8WUT4 740 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 TEKT4Q8WW24 435 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 PIH1D2Q8WWB5 315 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 SCAMP4Q969E2 229 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 SH3KBP1Q96B97 665 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 RNF31Q96EP0 1072 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 GPN2Q9H9Y4 310 aaPredicted RBP9.3□□□□□ -0.92
SNX17-207ENST00000489402 PCDH18Q9HCL0 1135 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 RTN4Q9NQC3 1192 aaKnown RBP9.3□□□□□ -0.92
SNX17-207ENST00000489402 OCIAD1Q9NX40 245 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 VPS18Q9P253 973 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 ZNHIT2Q9UHR6 403 aa9.3□□□□□ -0.92
SNX17-207ENST00000489402 NBPF19A0A087WUL8 3843 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 SMTNL1A8MU46 457 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 FZD6O60353 706 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 MAP3K6O95382 1288 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 PDHA1P08559 390 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 CES1P23141 567 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 MAP4P27816 1152 aaKnown RBP9.29□□□□□ -0.92
SNX17-207ENST00000489402 SSR1P43307 286 aaKnown RBP9.29□□□□□ -0.92
SNX17-207ENST00000489402 MAPK9P45984 424 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 ZNF165P49910 485 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 STC1P52823 247 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 EPHA4P54764 986 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 MC1RQ01726 317 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 PTSQ03393 145 aa9.29□□□□□ -0.92
SNX17-207ENST00000489402 TDRD12Q587J7 1177 aaKnown RBP9.29□□□□□ -0.92
SNX17-207ENST00000489402 WDR74Q6RFH5 385 aaPredicted RBP9.29□□□□□ -0.92
SNX17-207ENST00000489402 CHST15Q7LFX5 561 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms