RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 OGFOD3Q6PK18 319 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 RAD9BQ6WBX8 426 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 DAAM2Q86T65 1068 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ACRBPQ8NEB7 543 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 EID2BQ96D98 161 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 MRFAP1L1Q96HT8 127 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 GFM1Q96RP9 751 aaKnown RBP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 TRIB3Q96RU7 358 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 HEMGNQ9BXL5 484 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ADGRE3Q9BY15 652 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 GSDMCQ9BYG8 508 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 LRRN3Q9H3W5 708 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 C10orf88Q9H8K7 445 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 GLOD4Q9HC38 313 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ASCL3Q9NQ33 180 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 LRIT1Q9P2V4 623 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 RPL26L1Q9UNX3 145 aaKnown RBP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 DUSP10Q9Y6W6 482 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 hCG_1818297A0A087WSY0 165 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 A0A0A6YYK5 440 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 RRP8O43159 456 aaKnown RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 NDUFA10O95299 355 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 ECEL1O95672 775 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 IVLP07476 585 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 HGFP14210 728 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 GLB1P16278 677 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 TEAD1P28347 426 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 ACTR1BP42025 376 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 SPINT3P49223 89 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 ACTR1AP61163 376 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 TFDP2Q14188 446 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 TFDP3Q5H9I0 405 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 ZNF648Q5T619 568 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 C11orf63Q6NUN7 778 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 LRRC69Q6ZNQ3 347 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 TMPRSS9Q7Z410 1059 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 SPRED1Q7Z699 444 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 KATNAL2Q8IYT4 538 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 NRSN1Q8IZ57 195 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 TFB1MQ8WVM0 346 aaKnown RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 PRR11Q96HE9 360 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 OR2M4Q96R27 311 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 PANX2Q96RD6 677 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 LYSMD1Q96S90 227 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 SLC25A51Q9H1U9 297 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 PKD2L2Q9NZM6 624 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 DNPEPQ9ULA0 475 aa13.93□□□□□ -0.18
VTI1A-206ENST00000489142 CNOT6Q9ULM6 557 aaKnown RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 REXO2Q9Y3B8 237 aaKnown RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 EPN1Q9Y6I3 576 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-206ENST00000489142 BPTFQ12830 3046 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 TRBV23OR9-2A0A075B6M9 112 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 ZRANB2O95218 330 aaKnown RBP eCLIP13.92□□□□□ -0.18
VTI1A-206ENST00000489142 NFKB1P19838 968 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 CD68P34810 354 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-206ENST00000489142 NAP1L1P55209 391 aaKnown RBP13.92□□□□□ -0.18
VTI1A-206ENST00000489142 PCBP4P57723 403 aaKnown RBP13.92□□□□□ -0.18
VTI1A-206ENST00000489142 OR1D5P58170 312 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 CDK18Q07002 472 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 WASHC5Q12768 1159 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 AMZ1Q400G9 498 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 PYCR3Q53H96 274 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 TEX44Q53QW1 395 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 HENMT1Q5T8I9 393 aaKnown RBP13.92□□□□□ -0.18
VTI1A-206ENST00000489142 GALNT13Q8IUC8 556 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 SPACA3Q8IXA5 215 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 NAGSQ8N159 534 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 EXD1Q8NHP7 514 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 WDR48Q8TAF3 677 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 CCHCR1Q8TD31 782 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 P3H4Q92791 437 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 COX14Q96I36 57 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 ZNF578Q96N58 590 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-206ENST00000489142 HERPUD2Q9BSE4 406 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 CDH19Q9H159 772 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 FAM83DQ9H4H8 585 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 ZFYVE1Q9HBF4 777 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 TRNAU1APQ9NX07 287 aaKnown RBP13.92□□□□□ -0.18
VTI1A-206ENST00000489142 ZNHIT2Q9UHR6 403 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 ZNF711Q9Y462 761 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 SPO11Q9Y5K1 396 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 IGSF10Q6WRI0 2623 aa13.92□□□□□ -0.18
VTI1A-206ENST00000489142 CACNA1GO43497 2377 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 CCDC187A0A096LP49 1063 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 RHPN2P1A8MT19 583 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 AURKAO14965 403 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 DXOO77932 396 aaKnown RBP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 TNFSF15O95150 251 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 EML2O95834 649 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 RBMS1P29558 406 aaKnown RBP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 ALDH4A1P30038 563 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 INHBCP55103 352 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 B4GALNT1Q00973 533 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 AADACL2Q6P093 401 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 ZNF761Q86XN6 746 aaPredicted RBP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 RCOR2Q8IZ40 523 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms