RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 HMGCLP35914 325 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 GNPDA1P46926 289 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 SNX1Q13596 522 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 NR0B2Q15466 257 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 CCNG2Q16589 344 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 CDKN3Q16667 212 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 HENMT1Q5T8I9 393 aaKnown RBP12.82□□□□□ -0.36
PHF1-210ENST00000488767 DRICH1Q6PGQ1 229 aaPredicted RBP12.82□□□□□ -0.36
PHF1-210ENST00000488767 C4orf22Q6V702 233 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 TMC3Q7Z5M5 1100 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 TAF8Q7Z7C8 310 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 LINC00523Q86TU6 105 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 GALNT13Q8IUC8 556 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 PHYKPLQ8IUZ5 450 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 TRAM1L1Q8N609 369 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 PNPLA1Q8N8W4 532 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 C1orf54Q8WWF1 131 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 OR1E3Q8WZA6 343 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 GSDMCQ9BYG8 508 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 ABCG4Q9H172 646 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 TCEAL2Q9H3H9 227 aaPredicted RBP12.82□□□□□ -0.36
PHF1-210ENST00000488767 SUDS3Q9H7L9 328 aaPredicted RBP12.82□□□□□ -0.36
PHF1-210ENST00000488767 TRMT1Q9NXH9 659 aaKnown RBP12.82□□□□□ -0.36
PHF1-210ENST00000488767 VPS18Q9P253 973 aa12.82□□□□□ -0.36
PHF1-210ENST00000488767 NFKBIL1Q9UBC1 381 aaPredicted RBP12.82□□□□□ -0.36
PHF1-210ENST00000488767 COL5A1P20908 1838 aaPredicted RBP12.82□□□□□ -0.36
PHF1-210ENST00000488767 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 CES2O00748 559 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 YY2O15391 372 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 STX7O15400 261 aaKnown RBP12.81□□□□□ -0.36
PHF1-210ENST00000488767 SLC25A14O95258 325 aaPredicted RBP12.81□□□□□ -0.36
PHF1-210ENST00000488767 AGTP01019 485 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 CEACAM5P06731 702 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 IVLP07476 585 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 ACP1P24666 158 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 FDFT1P37268 417 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 CHRNA4P43681 627 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 ACADVLP49748 655 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 SHC2P98077 582 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 E2F1Q01094 437 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 DNAJC3Q13217 504 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 BIRC2Q13490 618 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 RFLNAQ6ZTI6 216 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 PELI3Q8N2H9 469 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 ARL10Q8N8L6 244 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 NAT6Q93015 286 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 RTP4Q96DX8 246 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 APOLD1Q96LR9 279 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 FRMD8Q9BZ67 464 aaPredicted RBP12.81□□□□□ -0.36
PHF1-210ENST00000488767 ZCCHC2Q9C0B9 1178 aaKnown RBP12.81□□□□□ -0.36
PHF1-210ENST00000488767 RMI1Q9H9A7 625 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 MRPL40Q9NQ50 206 aaKnown RBP12.81□□□□□ -0.36
PHF1-210ENST00000488767 TRNAU1APQ9NX07 287 aaKnown RBP12.81□□□□□ -0.36
PHF1-210ENST00000488767 PAK5Q9P286 719 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
PHF1-210ENST00000488767 SUFUQ9UMX1 484 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 GPR34Q9UPC5 381 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 SLC17A4Q9Y2C5 497 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 GPSM3Q9Y4H4 160 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 SPO11Q9Y5K1 396 aa12.81□□□□□ -0.36
PHF1-210ENST00000488767 LRRK1Q38SD2 2015 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GPR89AB7ZAQ6 455 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 HYAL3O43820 417 aaPredicted RBP12.8□□□□□ -0.36
PHF1-210ENST00000488767 SOD1P00441 154 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GP1BAP07359 652 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GPR89BP0CG08 455 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 BPIP17213 487 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 LPOP22079 712 aaPredicted RBP12.8□□□□□ -0.36
PHF1-210ENST00000488767 SPAM1P38567 509 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GDF10P55107 478 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 LAMB3Q13751 1172 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 ITGA9Q13797 1035 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 LRP8Q14114 963 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 TCEA2Q15560 299 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 TAF1AQ15573 450 aaPredicted RBP12.8□□□□□ -0.36
PHF1-210ENST00000488767 OASLQ15646 514 aaKnown RBP12.8□□□□□ -0.36
PHF1-210ENST00000488767 RANBP10Q6VN20 620 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 MARK2Q7KZI7 788 aaKnown RBP12.8□□□□□ -0.36
PHF1-210ENST00000488767 RAB44Q7Z6P3 723 aaPredicted RBP12.8□□□□□ -0.36
PHF1-210ENST00000488767 SLCO6A1Q86UG4 719 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 CHCHD4Q8N4Q1 142 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 DNAAF3Q8N9W5 541 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GPR26Q8NDV2 337 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 OR6C4Q8NGE1 309 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GDAP1Q8TB36 358 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 TTC25Q96NG3 672 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 OR2M4Q96R27 311 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 C19orf43Q9BQ61 176 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 APOL2Q9BQE5 337 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 SCNM1Q9BWG6 230 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 TMEM168Q9H0V1 697 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 DPEP2Q9H4A9 486 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 BPIFA1Q9NP55 256 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GULP1Q9UBP9 304 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 NEUROG3Q9Y4Z2 214 aa12.8□□□□□ -0.36
PHF1-210ENST00000488767 GLYATL1P3A0A0U1RQE8 302 aa12.79□□□□□ -0.36
PHF1-210ENST00000488767 CPED1A4D0V7 1026 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms